Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq993 127 2e-24 seq560 84.2 2e-11 >seq993 Length=3989 Score = 127 bits (140), Expect = 2e-24 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | ||| | ||| || ||||| ||||||||||| || |||||||||||||| Sbjct 3398 CCTCCACGAAGCCTCAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGCG 3457 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | | || | |||||||||||||| ||| || | || | | ||||||||| ||| Sbjct 3458 AGTGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCTGGCGGG 3517 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCG 48677 | | |||||||||| || || ||||| | | || || ||||| | || | || Sbjct 3518 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCG--ATCGTATCCG-AGCTTTCG 3574 Query 48678 TC-TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | || | ||||||||||| |||||||| || |||||||| |||||||| Sbjct 3575 ACTTCCAAGGTTATGGTTTTCCCGGTGAGGGTCTTCACAAATATCTGCAT 3624 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/206 (71%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG-TCCTCCAGCTG 48582 ||||| ||| |||||| |||||||| ||||| || || ||| || || |||||||| Sbjct 3194 TGAAGAGTGGACTCCTTCTGAATGTTATAATCTGC-AAGAGTCCTTCCATCTTCCAGCTG 3252 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| || | |||| | | |||||| || || | || ||||||||| |||||| Sbjct 3253 CTTCCCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGGATACCTTCCTTGTCTTGAATTTT 3312 Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700 | ||||| | | || |||||||||| |||| ||| | || || || || ||| Sbjct 3313 CGCCTTGACGTTGTCG--ATGGTATCGGAGCTCTCCACCTCCAACGTGATCGTCTTCCCG 3370 Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| ||||| || |||||||| Sbjct 3371 GTCAGAGTCTTCACGAAGATCTGCAT 3396 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 |||| || || ||| |||||| || |||||||||||||| | | || | |||||| Sbjct 3644 ACTAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGCGAGTGTGCGGCCATCCTCC 3703 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 |||||||| ||| | | || || | |||||| ||| || | || ||||||||| | Sbjct 3704 AGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGA 3763 Query 48638 ATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 || || ||| | | | || || ||||| | ||| ||| | || ||||||| Sbjct 3764 ATCTTAGCCTTCACGTTGTCG--ATTGTATCTGAGCTCTCGACCTCCAGGGTGATGGTTT 3821 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | || ||||| || || || ||||||||||| Sbjct 3822 TCCCTGTGAGCGTCTTGACGAAAATCTGCAT 3852 >seq560 Length=29322 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| || |||||||| || || | || ||||||| || ||||||||| || || Sbjct 29129 TCCTTCTGGATGTTGTAGTCGGCGAGCGTCCGGCCGTCCTCGAGTTGCTTACCGGCGAAA 29188 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAG 48653 || | |||||||||||| ||| | | |||||| ||| ||| ||| ||| | | | Sbjct 29189 ATGAGCCGCTGCTGATCCGGCGGAATTCCTTCCTTATCCTGAATCTTCGCCTTCACGTTG 29248 Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713 || || || |||| || || ||| | || || || || || || || ||||||| Sbjct 29249 TCG--ATCGTGTCGGAGGATTCAACCTCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCA 29306 Query 48714 CAAAAATCTGCATC 48727 | || ||||||||| Sbjct 29307 CGAAGATCTGCATC 29320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421196348354684