Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1973 140 5e-29 seq748 120 5e-23 seq7195 116 6e-22 >seq1973 Length=10214 Score = 140 bits (154), Expect = 5e-29 Identities = 181/250 (72%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| || ||||||||||| || ||||| || || || || || ||| |||| |||||||| Sbjct 1113 TCTCCGGGATAACATCCAGGGCATCACGAAACCGGCGATTCGCCGTTTGGCCCGTCGTGG 1172 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || || ||||| || || || |||| || || | ||| | ||||||||||||||| Sbjct 1173 CGGCGTGAAGCGCATCAGCGGCCTGATCTACGAGGAAACTCGCGGTGTTTTGAAGATCTT 1232 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 || ||| || |||| ||||| || ||| ||||| || ||| || || || || Sbjct 1233 TCTTGAGAATGTAATCCGAGATGCCGTCACCTACACCGAACATGCTCGCCGGAAAACCGT 1292 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 |||| | |||||| | || ||||| | ||| | || || |||| | | || || ||||| Sbjct 1293 CACCGCGATGGATGTTGTTTATGCGCTCAAAAGGCAGGGTCGTACGCTCTACGGCTTTGG 1352 Query 16693 AAGTTAATCT 16702 |||||||| Sbjct 1353 CGGTTAATCT 1362 >seq748 Length=6893 Score = 120 bits (132), Expect = 5e-23 Identities = 186/266 (70%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| || || | | || || |||||||| ||||||||||| ||||| || || Sbjct 1462 GCGAAGCGGCACCGAAAAGTGCTGCGGGATAACATTCAAGGAATCACGAAGCCGGCGATT 1521 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || |||| ||||| || || |||||||| || || | |||| ||||| | Sbjct 1522 CGCCGATTGGCGCGTCGCGGCGGCGTCAAGCGCATCAGCGGCCTCATCTACGAAGAAACG 1581 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || | |||||||||||| ||| ||| || | || || || ||| |||||| Sbjct 1582 CGCGGAGTCCTCAAGATCTTCCTCGAGAACGTCATTCGCGACGCCGTCACCTACACCGAG 1641 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| ||| | ||||| |||||||||| |||| | || || Sbjct 1642 CACGCCCGCCGCAAAACTGTAACCGCTATGGACGTCGTCTATGCTCTGAAGAGGCAGGGA 1701 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTA 16698 || | | || ||||| || |||| Sbjct 1702 CGCACTCTCTACGGTTTCGGCGGTTA 1727 >seq7195 Length=3894 Score = 116 bits (128), Expect = 6e-22 Identities = 174/247 (70%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| ||||| ||||| || || ||||| ||||| || ||||| |||||||| | | || Sbjct 2400 TCTCCGAGACAACATTCAGGGGATCACGAAGCCGGCGATCCGGCGTCTGGCCAGAAGAGG 2341 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || || ||||| |||| || | |||| || |||| || | ||| |||||||||| Sbjct 2340 CGGCGTGAAGCGAATCTCCGGCCTCATCTACGAGGAGACCCGCGGAGTTCTGAAGATCTT 2281 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 ||| ||| ||| |||| || || | || ||||| |||||| || ||||| || Sbjct 2280 CCTGGAGAACGTCATCCGCGACGCCGTGACTTACACCGAACACGCTCGCCGGAAGACCGT 2221 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 |||| ||||||| ||||||| || | || | || || || | | | || || || || Sbjct 2220 CACCGCCATGGACGTCGTCTACGCTCTCAAGAGACAGGGACGGACGCTGTACGGATTCGG 2161 Query 16693 AAGTTAA 16699 ||||| Sbjct 2160 CGGTTAA 2154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79065431544012