Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq53 131 1e-25 seq993 116 2e-21 seq5913 111 1e-19 seq4164 84.2 1e-11 >seq53 Length=3489 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| ||||||||| |||| || |||||||| Sbjct 1029 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGT 1088 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1089 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1123 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 3074 CTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTC 3133 Query 20007 GGTAATATTTAGCCTT 20022 | |||| |||||| Sbjct 3134 GCCCGTATTCAGCCTT 3149 >seq993 Length=3989 Score = 116 bits (128), Expect = 2e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 || |||||| ||||||||||||||||| || || |||||||||| | ||| | || Sbjct 3412 CAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGCGAGTGTACGGCCATC 3471 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | || || ||||| || || || | || ||||| | |||| |||||| ||||| Sbjct 3472 CTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCTGGCGGGATGCCTTCCTTGTC 3531 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || || ||| || || | || ||||| ||||| ||||| || || || || Sbjct 3532 CTGGATCTTAGCCTTGACGTTGTCGATCGTATCCGAGCTTTCGACTTCCAAGGTTATGGT 3591 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 ||| || || | ||| ||||| |||||||||||| Sbjct 3592 TTTCCCGGTGAGGGTCTTCACAAATATCTGCATG 3625 >seq5913 Length=2750 Score = 111 bits (122), Expect = 1e-19 Identities = 70/76 (92%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1909 CTCTCTCTTCAGAGTGCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGT 1968 Query 20007 GGTAATATTTAGCCTT 20022 ||||||||||| || Sbjct 1969 TATAATATTTAGCTTT 1984 >seq4164 Length=15189 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 |||| || ||||| ||||| ||||| || || || | ||| || |||| || Sbjct 437 ACCAGGTGGAGAGTAGATTCCTTCTGAATGTTATAGTCGGCCAAGGTCCGGCCGTCCTCG 378 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | ||||||||||| || || || | ||||| || | |||| ||||| |||||| Sbjct 377 AGCTGTTTTCCGGCGAAGATCAGCCTCTGTTGGTCCGGCGGGATACCTTCCTTGTCCTGG 318 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || || |||||| || | || || || ||||| ||||||| || || || || Sbjct 317 ATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCCACTTCTAGGGTGATCGTCTTT 258 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || | |||||||||||| || ||||| Sbjct 257 CCGGTGAGGGTTTTCACGAAGATTTGCAT 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334903586106404