Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1493 93.3 5e-14 seq5218 89.7 6e-13 seq4068 84.2 2e-11 >seq1493 Length=6650 Score = 93.3 bits (102), Expect = 5e-14 Identities = 88/109 (81%), Gaps = 5/109 (5%) Strand=Plus/Minus Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGT-TCCCT-CGGGA 126320 ||||||||| ||||||||||||||||||||||||| | ||| |||||| ||| | ||| Sbjct 6447 ACAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTCCGTGAGGGG 6388 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTTGTT 126369 |||||||||| || ||||| |||||| | ||| || |||||| || Sbjct 6387 GCGTGGGTTCAAATCCCACTTCTGACACAACATTTTT---ATTTTTTTT 6342 >seq5218 Length=4234 Score = 89.7 bits (98), Expect = 6e-13 Identities = 78/95 (82%), Gaps = 4/95 (4%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||||| | | |||| Sbjct 4080 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTTCTCGTGAGAGAGC 4139 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||||| || ||||| ||||| |||||| || Sbjct 4140 GTGGGTTCAAATCCCACTTCTGAC--ATTATTTTT 4172 >seq4068 Length=3720 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/101 (80%), Gaps = 5/101 (5%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 1761 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 1704 Query 126328 TTCGAACCCCACACCTGACAAATTATTATTGGAATTTTTGT 126368 ||| || |||||| ||| | ||| ||||| |||||||| Sbjct 1703 TTCAAATCCCACAGCTGTC-AATATTTATT--TATTTTTGT 1666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556786431240160