Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq993 104 2e-17 >seq993 Length=3989 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | ||||| || ||| |||| | || ||||| | | || Sbjct 3396 ATGCAGATCTTCGTGAAGACTCTGACCGGGAAGACGATCACGTTGGAGGTGGAGAGCTCC 3337 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| ||||||||||||||||| ||||| ||||| || || Sbjct 3336 GATACCATCGACAACGTCAAGGCGAAAATTCAAGACAAGGAAGGTATCCCACCAGACCAG 3277 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || || ||| | || ||| | || | | ||||| ||| Sbjct 3276 CAGAGGCTGATTTTTGCTGGGAAGCAGCTGGAAGATGGAAGGACTCTTGCAGATTATAAC 3217 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || ||||| Sbjct 3216 ATTCAGAAGGAGTCCAC 3200 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || || ||||| |||| || || || || | | | Sbjct 3852 ATGCAGATTTTCGTCAAGACGCTCACAGGGAAAACCATCACCCTGGAGGTCGAGAGCTCA 3793 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| | | || || ||||| |||||||||||||| ||||| || || Sbjct 3792 GATACAATCGACAACGTGAAGGCTAAGATTCAGGACAAGGAGGGTATCCCACCGGACCAG 3733 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || |||||||| || ||| | |||||| |||||| || | ||||||||| Sbjct 3732 CAGAGGTTGATCTTTGCCGGAAAGCAGCTGGAGGATGGCCGCACACTCGCTGATTACAAC 3673 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 3672 ATCCAGAAGGAGTCCAC 3656 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| ||||| | || | ||||| |||| | | Sbjct 3624 ATGCAGATATTTGTGAAGACCCTCACCGGGAAAACCATAACCTTGGAAGTCGAAAGCTCG 3565 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| | |||| || || || |||||||| || || || || ||||| Sbjct 3564 GATACGATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCGCCAGATCAG 3505 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || |||||||| ||| | |||||| ||| || || | ||||||||| Sbjct 3504 CAGAGGCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACACTCGCTGATTACAAC 3445 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 3444 ATCCAGAAGGA 3434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419673346692460