Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq524 116 8e-21 seq2634 95.1 2e-14 seq7191 91.5 3e-13 seq3258 91.5 3e-13 seq453 91.5 3e-13 seq906 87.8 4e-12 >seq524 Length=7835 Score = 116 bits (128), Expect = 8e-21 Identities = 201/287 (70%), Gaps = 4/287 (1%) Strand=Plus/Minus Query 218517 TGACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCC 218576 |||||| | ||||||| |||||||||||||| |||| || || | || ||||| Sbjct 3076 TGACTTTGTTCACAAGGAACTCATTCTTTTCTCAGTTGCTGATCTGCAGAGATCAATTCC 3017 Query 218577 CAGCG-TGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGC 218635 | || || | ||||| | || || || | |||||||| || ||||||| Sbjct 3016 -ATCGATGATTGATGGATTGAAACCTGGCCAAAGAAAGATCCTTTTCTGTTCATTCAAAA 2958 Query 218636 GGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTG 218695 ||||| | || | ||| || || |||||||| || |||||||| || || ||| | Sbjct 2957 GGAACTTTGTGAAGGAAGCAAAAGTTGCTCAGTTCTCCGGTTATGTTTCAGAGCATTCAG 2898 Query 218696 GCTACCATCACGGTGAGCAGAGTCT-GCAGGGTGCCATTGTAGGCATGGCACAGGACTAT 218754 || || || || ||||||||||| ||||| ||||| | |||||||| ||||| | Sbjct 2897 CTTATCACCATGGAGAGCAGAGTCTTGCAGGCA-CCATTATTGGCATGGCTCAGGATTTC 2839 Query 218755 GTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGG 218801 || || || |||||||| || | || | || || ||||||||||| Sbjct 2838 GTCGGGAGCAACAACATAAATCTTCTCTTGCCAAATGGTCAGTTTGG 2792 >seq2634 Length=15369 Score = 95.1 bits (104), Expect = 2e-14 Identities = 61/67 (91%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 ||||||| |||||||||||||||||||| || ||||||| || |||||||||||||||| Sbjct 15178 TAGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 15237 Query 142562 GCCCCAC 142568 ||||||| Sbjct 15238 GCCCCAC 15244 >seq7191 Length=3010 Score = 91.5 bits (100), Expect = 3e-13 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || ||||| |||||||||||||||||||| || ||||||| || ||||||||||||||| Sbjct 2551 ATTGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 2610 Query 142561 AGCCCCAC 142568 |||||||| Sbjct 2611 AGCCCCAC 2618 >seq3258 Length=8595 Score = 91.5 bits (100), Expect = 3e-13 Identities = 194/287 (68%), Gaps = 2/287 (1%) Strand=Plus/Minus Query 218517 TGACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCC 218576 |||||| | ||||||| || ||||||||||| ||| | || | || || || Sbjct 5695 TGACTTTGTTCACAAGGAACTTATTCTTTTCTCAGTTGCCGATCTTCAGAGATCAATCCC 5636 Query 218577 CAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCG 218636 |||| ||||| | || ||| || | ||||| || || | |||| ||| | Sbjct 5635 GTCAATGGTTGATGGTTTGAAACCAGGCCAAAGAAAGATACTTTTCTGCTCATTTAAGAG 5576 Query 218637 GAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGG 218696 |||| | || | ||| || || || ||||| || || |||||||| || ||| | Sbjct 5575 GAACTTCGTAAAGGAAGCAAAAGTTGCGCAGTTCTCCGGGTATGTATCGGAGCATTCGGC 5516 Query 218697 CTACCATCACGGTGAGCAGAGTCT-GCAGGGTGCCATTGTAGGCATGGCACAGGACTATG 218755 || ||||| || ||||| ||||| ||| | |||| | |||||||| || || | || Sbjct 5515 TTATCATCATGGAGAGCAAAGTCTTGCAAGCA-CCATAATTGGCATGGCCCAAGATTTTG 5457 Query 218756 TGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGT 218802 | || || |||||||| || | || | || || |||||||||||| Sbjct 5456 TTGGGAGCAACAACATAAATCTTCTCTTGCCAAATGGTCAGTTTGGT 5410 >seq453 Length=16086 Score = 91.5 bits (100), Expect = 3e-13 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || ||||| |||||||||||||||||||| || ||||||| || ||||||||||||||| Sbjct 10973 ATTGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 10914 Query 142561 AGCCCCAC 142568 |||||||| Sbjct 10913 AGCCCCAC 10906 >seq906 Length=5413 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/70 (89%), Gaps = 1/70 (1%) Strand=Plus/Minus Query 142499 AGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTT 142558 |||| ||||| |||||||||||||||||||| || ||||||| || ||||||||||||| Sbjct 822 AGAT-GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTT 764 Query 142559 CGAGCCCCAC 142568 ||| |||||| Sbjct 763 CGAACCCCAC 754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027696100705244