Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq560 158 3e-33 seq4164 143 6e-29 seq993 131 4e-25 >seq560 Length=29322 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || ||||| |||| || ||| || ||||| || ||||||||| Sbjct 29093 CCGCCGCGGAGGCGGAGGACGAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCG 29152 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || ||||| || | ||| || || ||||| || || ||||| ||| || Sbjct 29153 AGCGTCCGGCCGTCCTCGAGTTGCTTACCGGCGAAAATGAGCCGCTGCTGATCCGGCGGA 29212 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| |||||||| || ||||| |||||||| || || | ||| ||||| || Sbjct 29213 ATTCCTTCCTTATCCTGAATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGGATTCAACC 29272 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||||||||||||| || || || || ||||| |||||||| Sbjct 29273 TCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 29319 >seq4164 Length=15189 Score = 143 bits (158), Expect = 6e-29 Identities = 171/231 (74%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| |||||||| | || || | ||| | || ||| || ||||| || |||||||| Sbjct 228 TCCGCCGCGGAGGCGGAGGACCAAATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGC 169 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| ||||| || | |||||||| |||||||| || | |||||| ||||| Sbjct 168 AAGGGTGCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATAAGCCTCTGTTGG---TCTGG 112 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | |||||||||||||||||||| || || || ||||| || || | ||| ||| Sbjct 111 GGGTATTCCTTCTTTATCCTGGATCTTGGCCTTGACGTTATCGATTGTGTCGGAGCTTTC 52 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| || || ||||| ||||| || ||||| |||||||| Sbjct 51 AACCTCAAGGGTGATAGTTTTGCCGGTGAGAGTTTTCACGAAGATCTGCAT 1 Score = 127 bits (140), Expect = 5e-24 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || || ||||||||||| | || || ||||| || | |||||||| ||||| Sbjct 420 TTCCTTCTGAATGTTATAGTCGGCCAAGGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAA 361 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||||| | |||||| ||||| ||||| || |||||||| || || |||||||| Sbjct 360 GATCAGCCTCTGTTGGTCCGGCGGGATACCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 301 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| ||| ||||| || ||||||||||| ||||| || || || || Sbjct 300 GTCGATGGTGTCGGAGCTTTCCACTTCTAGGGTGATCGTCTTTCCGGTGAGGGTTTTCAC 241 Query 288462 GAATATCTGCATT 288474 ||| || |||||| Sbjct 240 GAAGATTTGCATT 228 >seq993 Length=3989 Score = 131 bits (144), Expect = 4e-25 Identities = 169/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || ||||| | ||| || || |||| ||| || || || || ||||| || || Sbjct 3169 TCCTCCACGGAGACGAAGCACAAGGTGAAGAGTGGACTCCTTCTGAATGTTATAATCTGC 3228 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | ||| ||||| | || || || || || ||||| | ||| || ||| Sbjct 3229 AAGAGTCCTTCCATCTTCCAGCTGCTTCCCAGCAAAAATCAGCCTCTGCTGGTCTGGTGG 3288 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTC 288422 ||| ||||| || || || |||||||| || ||||| || || | |||| ||| || Sbjct 3289 GATACCTTCCTTGTCTTGAATTTTCGCCTTGACGTTGTCGATGGTATCGGAGCTC---TC 3345 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || | ||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 3346 CACCTCCAACGTGATCGTCTTCCCGGTCAGAGTCTTCACGAAGATCTGCATT 3397 Score = 113 bits (124), Expect = 1e-19 Identities = 167/234 (71%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || || || || || | |||| ||||| || || ||||| || || || || Sbjct 3397 TCCTCCACGAAGCCTCAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGC 3456 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || || || || || | || || || |||||||| || | ||| ||| ||||| Sbjct 3457 GAGTGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGA---TCTGG 3513 Query 288366 ---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA--- 288419 ||| ||||| || |||||||| || || || ||||| || || | ||| ||| Sbjct 3514 CGGGATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATCGTATC---CGAGCT 3570 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| ||||| | || || || |||||||| || ||||| || ||||||||||| Sbjct 3571 TTCGACTTCCAAGGTTATGGTTTTCCCGGTGAGGGTCTTCACAAATATCTGCAT 3624 Score = 111 bits (122), Expect = 4e-19 Identities = 167/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| | || || || || | ||| || || ||||| || || | Sbjct 3622 CATG-CCACCACGGAGACGGAGGACTAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAAT 3680 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | ||||| ||||| || || || | || ||||| || ||||||| | ||| || Sbjct 3681 CAGCGAGTGTGCGGCCATCCTCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCG 3740 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 |||||| || || || ||||| || || || |||||||| || || | ||| |||| Sbjct 3741 GTGGGATACCCTCCTTGTCCTGAATCTTAGCCTTCACGTTGTCGATTGTATCTGAGCTC- 3799 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| || ||||| || || ||||||||||| |||||||| Sbjct 3800 --TCGACCTCCAGGGTGATGGTTTTCCCTGTGAGCGTCTTGACGAAAATCTGCAT 3852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179492918583752