Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq560 109 5e-19 seq4164 104 2e-17 seq993 89.7 5e-13 >seq560 Length=29322 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 |||||||| | | || || || |||| |||||||| || || |||||||| || ||| Sbjct 29093 CCGCCGCGGAGGCGGAGGACGAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCG 29152 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || |||| || || ||||| ||||| |||||||||||||||| || || ||| Sbjct 29153 AGCGTCCGGCCGTCCTCGAGTTGCTTACCGGCGAAAATGAGCCGCTGCTGATCCGGCGGA 29212 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 |||||||| || || || || || ||| || || | || || || || || Sbjct 29213 ATTCCTTCCTTATCCTGAATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGGATTCAACC 29272 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || | ||||| || || | ||||| ||||| || ||||| || Sbjct 29273 TCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 29322 >seq4164 Length=15189 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 |||||||| | | || || | ||| | |||||||| || || |||||||| || || Sbjct 227 CCGCCGCGGAGGCGGAGGACCAAATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCA 168 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| |||| || ||||| || ||||| | || |||| ||| ||||| || || Sbjct 167 AGGGTGCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATAAGCCTCTGTTGGTCTGGGGGT 108 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 ||||||||||| || || || || ||| || || | ||| || | || || Sbjct 107 ATTCCTTCTTTATCCTGGATCTTGGCCTTGACGTTATCGATTGTGTCGGAGCTTTCAACC 48 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | || |||||||| | |||||| ||||| || ||||| Sbjct 47 TCAAGGGTGATAGTTTTGCCGGTGAGAGTTTTCACGAAGATCTGCAT 1 >seq993 Length=3989 Score = 89.7 bits (98), Expect = 5e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || |||||||| | || || || ||||| |||||||| || || | |||||| | || Sbjct 3869 AGGACTAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCC 3928 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || ||||||||||| || | || |||| |||||| || || ||||| |||||||| || Sbjct 3929 TCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCTTTGTC 3987 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || ||||| || | || || || || || ||||||||||| |||| ||||| | || Sbjct 3641 AGGACTAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGCGAGTGTGCGGCCATCC 3700 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| |||||| | || | || ||||||||| || || || || || || || Sbjct 3701 TCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCC 3760 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | |||||| | || || || | || | ||| Sbjct 3761 TGAATCTTAGCCTTCACGTTGTCGATTGTATCTGAGCTCTCGACCTCCAGGGTGATGGTT 3820 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || | || || |||||||| ||||| Sbjct 3821 TTCCCTGTGAGCGTCTTGACGAAAATCTGCAT 3852 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || ||||||||||| |||| || || | || || |||||||||||||| | Sbjct 3434 TCCTTCTGGATGTTGTAATCAGCGAGTGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAG 3493 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 ||||||| |||||| || || || || ||||| || || || || || ||| || Sbjct 3494 ATGAGCCTCTGCTGATCTGGCGGGATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTG 3553 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | ||||| | || ||||| | |||| ||| || ||||| | || || || Sbjct 3554 TCGATCGTATCCGAGCTTTCGACTTCCAAGGTTATGGTTTTCCCGGTGAGGGTCTTCACA 3613 Query 64433 AAAATTTGCAT 64443 || || ||||| Sbjct 3614 AATATCTGCAT 3624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499578072436960