Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq4164 105 6e-18 seq993 104 2e-17 >seq4164 Length=15189 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||| ||||| | || | |||||||| | || || || || || || ||||| ||| | Sbjct 228 TCCGCCGCGGAGGCGGAGGACCAAATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGC 169 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | ||||| || || ||||||||||| ||| |||| | | ||| || || || || Sbjct 168 AAGGGTGCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATAAGCCTCTGTTGGTCTGGGGG 109 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||| || || || ||| ||| || ||||| | |||| ||||| | || || || Sbjct 108 TATTCCTTCTTTATCCTGGATCTTGGCCTTGACGTTATCGATTGTGTCGGAGCTTTCAAC 49 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | ||||||||||| |||||||| || || |||||||| Sbjct 48 CTCAAGGGTGATAGTTTTGCCGGTGAGAGTTTTCACGAAGATCTGCAT 1 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| || || ||||| || || ||| ||| || || || || ||||||||||| Sbjct 425 GTAGATTCCTTCTGAATGTTATAGTCGGCCAAGGTCCGGCCGTCCTCGAGCTGTTTTCCG 366 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| | ||| || || || || || || ||||||||| ||| || ||| Sbjct 365 GCGAAGATCAGCCTCTGTTGGTCCGGCGGGATACCTTCCTTGTCCTGGATCTTGGCCTTC 306 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | || || ||||| | ||| | ||| || ||||| || || Sbjct 305 ACGTTG-TCGATGGTGTCGGAGCTTTCCACTTCTAGGGTGATCGTCTTTCCGGTGAGGGT 247 Query 127096 TTTTACAAAAATCTGCAT 127113 ||| || || || ||||| Sbjct 246 TTTCACGAAGATTTGCAT 229 >seq993 Length=3989 Score = 104 bits (114), Expect = 2e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || |||||||| | | ||||| ||| || ||||| ||||| Sbjct 3656 GTGGACTCCTTCTGGATGTTGTAATCAGCGAGTGTGCGGCCATCCTCCAGCTGCTTTCCG 3715 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || ||||||| | |||||| || || || || |||||||||||| || || ||| Sbjct 3716 GCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGAATCTTAGCCTTC 3775 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| || || | |||||||| || | ||| | ||||| || || || || Sbjct 3776 ACGTTG-TCGATTGTATCTGAGCTCTCGACCTCCAGGGTGATGGTTTTCCCTGTGAGCGT 3834 Query 127096 TTTTACAAAAATCTGCATG 127114 || || |||||||||||| Sbjct 3835 CTTGACGAAAATCTGCATG 3853 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| || ||||| | | || | ||| || ||||| || ||| Sbjct 3200 GTGGACTCCTTCTGAATGTTATAATCTGCAAGAGTCCTTCCATCTTCCAGCTGCTTCCCA 3259 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | |||| | |||||| || || || || || |||||||| |||||| |||| Sbjct 3260 GCAAAAATCAGCCTCTGCTGGTCTGGTGGGATACCTTCCTTGTCTTGAATTTTCGCCTTG 3319 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| ||| ||| || | ||||| || || | || | ||| || ||||||||||| Sbjct 3320 ACGTTGT-CGATGGTATCGGAGCTCTCCACCTCCAACGTGATCGTCTTCCCGGTCAGAGT 3378 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 3379 CTTCACGAAGATCTGCAT 3396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475437296868160