Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq560 170 5e-37 seq4164 154 3e-32 seq993 138 3e-27 seq1098 89.7 1e-12 >seq560 Length=29322 Score = 170 bits (188), Expect = 5e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| |||||||| ||||| |||| ||||||||| || | |||| || || Sbjct 29108 AGGACGAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCGAGCGTCCGGCCGTCC 29167 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| |||||||| ||||| |||||||| ||||| ||||||||| ||| Sbjct 29168 TCGAGTTGCTTACCGGCGAAAATGAGCCGCTGCTGATCCGGCGGAATTCCTTCCTTATCC 29227 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| |||| ||||| | | ||| || ||||||||||||||| Sbjct 29228 TGAATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGGATTCAACCTCCAACGTGATCGTC 29287 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || |||||||| || || || Sbjct 29288 TTCCCCGTTAGGGTTTTCACGAAGATCTG 29316 >seq4164 Length=15189 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| ||||||||||| || ||||| || | ||| ||||| ||||| ||| Sbjct 449 CGAAGACGGAGGACCAGGTGGAGAGTAGATTCCTTCTGAATGTTATAGTCGGCCAAGGTC 390 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || ||||| |||||||||||||| || | ||| |||||||| || ||| Sbjct 389 CGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATCAGCCTCTGTTGGTCCGGCGGGATACCT 330 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||||||| |||| |||||| | |||| || || | Sbjct 329 TCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCCACTTCTAGG 270 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| || ||||| |||||||| || ||||| Sbjct 269 GTGATCGTCTTTCCGGTGAGGGTTTTCACGAAGATTTG 232 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||||| ||||| ||||| |||| ||||||||| || | || | || || Sbjct 212 AGGACCAAATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCC 153 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| |||||||||||||| || | ||| ||||| || ||||||||| ||| Sbjct 152 TCGAGCTGTTTTCCGGCGAAGATAAGCCTCTGTTGGTCTGGGGGTATTCCTTCTTTATCC 93 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||||| | |||| || || | ||||| || Sbjct 92 TGGATCTTGGCCTTGACGTTATCGATTGTGTCGGAGCTTTCAACCTCAAGGGTGATAGTT 33 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||||||||| || || || Sbjct 32 TTGCCGGTGAGAGTTTTCACGAAGATCTG 4 >seq993 Length=3989 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| ||||| |||||||| || | ||| || || || | ||||||||||||| Sbjct 3185 AGCACAAGGTGAAGAGTGGACTCCTTCTGAATGTTATAATCTGCAAGAGTCCTTCCATCT 3244 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || || || || || | ||||||||| || || ||||| || Sbjct 3245 TCCAGCTGCTTCCCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGGATACCTTCCTTGTCT 3304 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| || ||| ||| |||| ||| || | | || || ||||||||||||||| Sbjct 3305 TGAATTTTCGCCTTGACGTTGTCGATGGTATCGGAGCTCTCCACCTCCAACGTGATCGTC 3364 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| ||||| || || || Sbjct 3365 TTCCCGGTCAGAGTCTTCACGAAGATCTG 3393 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||||||||| |||||||| |||| |||||| ||||| | || | ||||| Sbjct 3641 AGGACTAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGCGAGTGTGCGGCCATCC 3700 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||||||||| ||||| | | |||||||||||| || || || ||| Sbjct 3701 TCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCC 3760 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| |||| || |||| | || || |||| ||||| || Sbjct 3761 TGAATCTTAGCCTTCACGTTGTCGATTGTATCTGAGCTCTCGACCTCCAGGGTGATGGTT 3820 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || ||||| || Sbjct 3821 TTCCCTGTGAGCGTCTTGACGAAAATCTG 3849 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| ||||| || | ||| ||||| |||||| |||| |||||| ||||| | || Sbjct 3404 CGAAGCCTCAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGCGAGTGTA 3463 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| ||||||||||| |||||||||||||| | |||||| || || || ||| Sbjct 3464 CGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCTGGCGGGATGCCT 3523 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| || || | |||| || ||||| Sbjct 3524 TCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATCGTATCCGAGCTTTCGACTTCCAAG 3583 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || |||||||| || || Sbjct 3584 GTTATGGTTTTCCCGGTGAGGGTCTTCACAAATATCTG 3621 Score = 105 bits (116), Expect = 2e-17 Identities = 97/123 (79%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| || |||||||| ||||||||||||| |||||||||||| | || Sbjct 3860 CGAAGACGGAGGACTAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGGGTG 3919 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| || |||||||| || | |||||| || || ||| ||| Sbjct 3920 CGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCTGGGGGAATGCCT 3979 Query 199529 TCT 199531 ||| Sbjct 3980 TCT 3982 Score = 87.8 bits (96), Expect = 4e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || || || || || |||||| ||||||||||||||||| | || ||||| ||| | ||| Sbjct 3270 CTGATTTTTGCTGGGAAGCAGCTGGAAGATGGAAGGACTCTTGCAGATTATAACATTCAG 3211 Query 200995 AAAGAGTCTACTCTTCACCTTGT 201017 || ||||| |||||||||||||| Sbjct 3210 AAGGAGTCCACTCTTCACCTTGT 3188 >seq1098 Length=28529 Score = 89.7 bits (98), Expect = 1e-12 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 199442 TTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATG 199501 ||||||| ||| || || || | || || |||||||| |||||||||||||||||||| Sbjct 19867 TTTTGGATGTTATAATCGGCAAGTGTTCTGCCATCTTCGAGCTGCTTTCCGGCGAAGATC 19926 Query 199502 AGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||| |||||| ||||||| Sbjct 19927 AAACGCTGCTGATCCGGAGGAATTCCT 19953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178760218895828