Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq4164 149 6e-31 seq560 109 5e-19 seq993 102 8e-17 seq3994 95.1 1e-14 >seq4164 Length=15189 Score = 149 bits (164), Expect = 6e-31 Identities = 164/216 (76%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| ||||| |||||||| |||||| | || || || | || Sbjct 1 ATGCAGATCTTCGTGAAAACTCTCACCGGCAAAACTATCACCCTTGAGGTTGAAAGCTCC 60 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| || ||||| ||||| ||| | ||||| Sbjct 61 GACACAATCGATAACG-TCAAGGCCAAGATCCAGGATAAAGAAGGAATACCCCCAGACCA 119 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||| |||| || | ||| || |||||||| || |||| |||||||| ||||||||| Sbjct 120 ACAGAGGCTTATCTTCGCCGGAAAACAGCTCGAGGACGGCCGCACCCTTGCCGACTACAA 179 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| |||||| |||| || |||||||| || || Sbjct 180 CATCCAGAAGGAATCGACCCTCCATTTGGTCCTCCG 215 >seq560 Length=29322 Score = 109 bits (120), Expect = 5e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| ||||| || ||||| || || ||||| | || || || || Sbjct 29322 AAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGTTGAATCC 29263 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | |||| | || | || || | || || || |||||||| | || Sbjct 29262 TCCGACACGATCGACAACG-TGAAGGCGAAGATTCAGGATAAGGAAGGAATTCCGCCGGA 29204 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || ||||||||||||| ||| || || || || || |||| || || ||| |||||| Sbjct 29203 TCAGCAGCGGCTCATTTTCGCCGGTAAGCAACTCGAGGACGGCCGGACGCTCGCCGACTA 29144 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCA 38446 ||||||||| |||||| |||| || || Sbjct 29143 CAACATCCAGAAGGAATCGACTCTTCA 29117 >seq993 Length=3989 Score = 102 bits (112), Expect = 8e-17 Identities = 157/216 (73%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || || || ||||| || |||||||| ||| | || ||||| | | Sbjct 3624 ATGCAGATATTTGTGAAGACCCTCACCGGGAAAACCATAACCTTGGAAGTCGAAAGCTCG 3565 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 || | | | |||| | || | || |||| ||||| || || || |||||| || | Sbjct 3564 GATACGATCGACAACG-TCAAGGCTAAGATCCAGGACAAGGAAGGCAT-CCCGCCAGATC 3507 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| ||||||| | ||| ||||| |||||||| || | || || ||| || |||| Sbjct 3506 AGCAGAGGCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACACTCGCTGATTACA 3447 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTG 38456 ||||||| ||||| ||| || || || ||||||||| Sbjct 3446 ACATCCAGAAGGAGAGC-ACTCTTCACTTGGTGCTG 3412 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || |||||||| || |||||||||||| | || |||||| | | Sbjct 3852 ATGCAGATTTTCGTCAAGACGCTCACAGGGAAAACCATCACCCTGGAGGTCGAGAGCTCA 3793 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | |||| | || | || || | ||||| ||||| || || | ||||| Sbjct 3792 GATACAATCGACAACG-TGAAGGCTAAGATTCAGGACAAGGAGGGTATCCCACCGGACCA 3734 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | || || || |||||||| || | ||||| ||| || ||||| Sbjct 3733 GCAGAGGTTGATCTTTGCCGGAAAGCAGCTGGAGGATGGCCGCACACTCGCTGATTACAA 3674 Query 38423 CATCCAAAAGGA 38434 |||||| ||||| Sbjct 3673 CATCCAGAAGGA 3662 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 |||||||| || |||||| | || || ||| |||| || | ||| ||||| ||||| || Sbjct 3987 GACAAAGAAGGCATTCCCCCAGATCAGCAGAGGCTGATCTTCGCTGGCAAGCAGCTCGAG 3928 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 || | |||||||| |||||||||||||||||||| | || || ||| | || || Sbjct 3927 GATGGCCGCACCCTTGCTGACTACAACATCCAAAAGGAGTCCACTCTCCATCTAGTCCTC 3868 Query 38457 CGT 38459 ||| Sbjct 3867 CGT 3865 >seq3994 Length=11157 Score = 95.1 bits (104), Expect = 1e-14 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 132882 CTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTT 132941 |||| | | | ||||||| |||||||| || | ||| ||||| |||||||| |||||||| Sbjct 10423 CTTGTAGAGCGAGCAAGCGAAGTCGCAGTGAAGGCCTTCGTCTCTGGAAATCAGTTCGTT 10364 Query 132942 GCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCG 132993 | ||| | |||||||||||| || || | || || |||||||| | |||| Sbjct 10363 GGAGAACGCCAAGCCGGGCATCAGCCCCCTCTTCTTCAGCCAAAAAACGGCG 10312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500106001922560