Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq4462 104 2e-16 seq5945 96.9 3e-14 >seq4462 Length=8952 Score = 104 bits (114), Expect = 2e-16 Identities = 275/416 (66%), Gaps = 8/416 (2%) Strand=Plus/Minus Query 517973 TCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT-ACAAGACGATTATCAAA 518031 ||| | |||| ||||||||||| || | || || ||| || | | ||||| || Sbjct 7564 TCTTTCTTATTCTTTCTCTTGAATTCCTGGAC-CAAGTGGTTCACCATTCTGTTATCGAA 7506 Query 518032 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 518091 |||||| ||||| | | ||||| || | || || | |||| ||| | ||| ||||| Sbjct 7505 ATCTTCGCCTCCGAGGTGAGTATCGCCGGCAGTTGCCTTGACTTCGAAGATTCCTTCTTC 7446 Query 518092 AAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT 518151 | | || |||| ||||| || || || || | || || || || || ||| | Sbjct 7445 GATTGTCAGTAGAGACACATCGAAAGTACCGCCGCCGAGGTCGAAGATGAGGACGTTCTT 7386 Query 518152 TTCTTTGTCT----TGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205 || | | | | || ||||| ||||| || |||| |||||| || || || || Sbjct 7385 CTCGCCGACGGCAGTAGCCTTCTTATCCAGACCGTAAGCAATAGCAGCGGCGGTGGGCTC 7326 Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265 || || || | || ||| || ||||| ||||| ||| ||||| || || || || | Sbjct 7325 GTTGATGATACGCATAACGTTGAGACCGGCAATGACTCCGGCATCCTTGGTAGCCTGACG 7266 Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAAT 518325 || || ||||||||||| ||||| || || | ||||||| | ||| | |||| Sbjct 7265 CTGAGAGTCGTTAAAATACGCAGGCACGGTCACGACGGCATTCTTAACTGAAGTTCCAAG 7206 Query 518326 ATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 518381 ||| || || || | ||||| ||| | | || ||| ||||| || | |||| Sbjct 7205 ATATGCCTCCGCGGTCTCCTTCATCTTAATGAGAACCATGGATGAGATCTCCTCTG 7150 >seq5945 Length=3495 Score = 96.9 bits (106), Expect = 3e-14 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 518189 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 518248 |||||||| || |||||||| || ||||| ||||| || || || |||||||||||| Sbjct 1461 GCAGCAGCGGTAGGTTCATTGATGATTCTTTGAACATCGAGGCCTGCTATTCTTCCTGCA 1520 Query 518249 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCA 518308 || || || ||||| || || | ||| || ||||| || || ||||| || || || | | Sbjct 1521 TCCTTCGTTGCTTGCCTCTGGGCATCATTGAAATAGGCCGGGACAGTGATCACAGCTTTA 1580 Query 518309 GTTACTTCTTTACCAA 518324 ||||| ||| |||| Sbjct 1581 GTTACCGATTTTCCAA 1596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780292224726904