Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq4164 131 2e-25 seq993 102 7e-17 seq2923 100 3e-16 seq560 95.1 1e-14 >seq4164 Length=15189 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || ||||| |||||||| || || || || ||| | || Sbjct 1 ATGCAGATCTTCGTGAAAACTCTCACCGGCAAAACTATCACCCTTGAGGTTGAAAGCTCC 60 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || |||||||| || |||||||||||||| || || ||| Sbjct 61 GACACAATCGATAACGTCAAGGCCAAGATCCAGGATAAAGAAGGAATACCCCCAGACCAA 120 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | ||||| ||||| |||||||| ||||| | | | | | || || ||| Sbjct 121 CAGAGGCTTATCTTCGCCGGAAAACAGCTCGAGGACGGCCGCACCCTTGCCGACTACAAC 180 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||||||||| || || ||||| | || | ||||| || Sbjct 181 ATCCAGAAGGAATCGACCCTCCATTTGGTCCTCCGCCTCCGCGGCGG 227 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | ||||| || ||||| || || || || || ||||| ||| | || Sbjct 229 ATGCAAATCTTCGTGAAAACCCTCACCGGAAAGACGATCACCCTAGAAGTGGAAAGCTCC 288 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || || || || ||| Sbjct 289 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGACCAA 348 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||| ||||| |||||||| ||||| | | | || | || |||||| Sbjct 349 CAGAGGCTGATCTTCGCCGGAAAACAGCTCGAGGACGGCCGGACCTTGGCCGACTATAAC 408 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| |||||||| || || ||| |||| | || | || ||||| Sbjct 409 ATTCAGAAGGAATCTACTCTCCACCTGGTCCTCCGTCTTCGTGGAGG 455 >seq993 Length=3989 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || ||| | || || || | || Sbjct 3396 ATGCAGATCTTCGTGAAGACTCTGACCGGGAAGACGATCACGTTGGAGGTGGAGAGCTCC 3337 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| || | ||| || |||||||| ||||| || || || || || Sbjct 3336 GATACCATCGACAACGTCAAGGCGAAA-ATTCAAGACAAGGAAGGTATCCCACCAGACCA 3278 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||| ||||| ||||| |||||||| ||| || | | |||||||||| Sbjct 3277 GCAGAGGCTGATTTTTGCTGGGAAGCAGCTGGAAGATGGAAGGACTCTTGCAGATTATAA 3218 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||| ||||| || || || ||| | ||| | || | || ||||| Sbjct 3217 CATTCAGAAGGAGTCCACTCTTCACCTTGTGCTTCGTCTCCGTGGAGG 3170 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || || ||||| ||||| || || | ||||| ||| | | Sbjct 3624 ATGCAGATATTTGTGAAGACCCTCACCGGGAAAACCATAACCTTGGAAGTCGAAAGCTCG 3565 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| ||||| || || || ||||| Sbjct 3564 GATACGATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCGCCAGATCAG 3505 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | ||||| ||||| || |||||||||||| | | | | ||||| ||| Sbjct 3504 CAGAGGCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACACTCGCTGATTACAAC 3445 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || ||||||||| || | | || ||||| Sbjct 3444 ATCCAGAAGGAGAGCACTCTTCACTTGGTGCTGAGGCTTCGTGGAGG 3398 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || ||||| || || ||||| || || || || || || | | Sbjct 3852 ATGCAGATTTTCGTCAAGACGCTCACAGGGAAAACCATCACCCTGGAGGTCGAGAGCTCA 3793 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | || | || || ||||| || ||||| || || || || || || || Sbjct 3792 GATACAATCGACAACGTGAAGGCTAAGATTCAGGACAAGGAGGGTATCCCACCGGACCAG 3733 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||||||| || |||||||||||| | | | | ||||| ||| Sbjct 3732 CAGAGGTTGATCTTTGCCGGAAAGCAGCTGGAGGATGGCCGCACACTCGCTGATTACAAC 3673 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 || || ||||| || || || ||| Sbjct 3672 ATCCAGAAGGAGTCCACTCTCCAC 3649 >seq2923 Length=6118 Score = 100 bits (110), Expect = 3e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| ||||| || || || |||| |||||||| || ||||| | || Sbjct 4280 ATGCAAATCTTCGCGAAAACCCTGACGGGGGAAACGATTACGCTGGAGGTAGAGAGCTCC 4339 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || | || || || || ||||| || |||| ||| || ||||| |||||| Sbjct 4340 GATTCCGTCGATCATGTGAAGTCGAAGATTCAGCACAAGGAATCGATTCCTCCGGATCAA 4399 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||| || ||||| |||||||||||||| ||| || | || || || Sbjct 4400 CAGCGGTTGATTTTCGCCGGCAAACAGCTGGAGGACGGTAGATCTCTGGCCGACTACAAT 4459 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAAC 24936 | || ||||||||||| || || | || | ||| ||||||| || ||||| Sbjct 4460 GTCCAGAAGGAATCGACTCTGCATCTCGTTCTTCGACTGCGCGGCGGAGGAAC 4512 >seq560 Length=29322 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| ||||| || || || || ||| | || || ||| || | Sbjct 29320 GATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGTTGAATCCTC 29261 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || ||||| || || || |||||||| || || ||||| Sbjct 29260 CGACACGATCGACAACGTGAAGGCGAAGATTCAGGATAAGGAAGGAATTCCGCCGGATCA 29201 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || | || || ||||| || || || ||||| | | | | || || || Sbjct 29200 GCAGCGGCTCATTTTCGCCGGTAAGCAACTCGAGGACGGCCGGACGCTCGCCGACTACAA 29141 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 ||| || ||||||||||| || ||| | || | || | ||||| |||| Sbjct 29140 CATCCAGAAGGAATCGACTCTTCACCTCGTCCTCCGCCTCCGCGGCGGCG 29091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449837516175520