Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq993 84.2 2e-11 seq5083 82.4 6e-11 >seq993 Length=3989 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTGA 110331 ||||| |||||||| || || | ||||| |||||||| ||| | ||| || | || Sbjct 3624 ATGCAGATATTTGTGAAGACCCTCACCGGGAAAACCATAACCTTGGAAGTCGAAAGCTCG 3565 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| ||| | | || || ||||| ||||| |||||| | || ||||| Sbjct 3564 -GATACGATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCGCCAGATCA 3506 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || || || || | || || || ||||||||||||| | | ||| | || |||||||| Sbjct 3505 GCAGAGGCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACACTCGCTGATTACAA 3446 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||| || || || || | ||| ||||| | || || || || |||| Sbjct 3445 CATCCAGAAGGAGAGCACTCTTCACTTGGTGCTGAGGCTTCGTGGAGGAA 3396 >seq5083 Length=6755 Score = 82.4 bits (90), Expect = 6e-11 Identities = 207/305 (68%), Gaps = 10/305 (3%) Strand=Plus/Minus Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGA-CACAACACAAACTTGCGGATGAAAC 34369 ||||| || ||||||||||| |||| ||| | ||| || || || |||||| Sbjct 4410 GATGATTTCCGTCTCCGGGTTTCCACAG-CCGTAGCACTGGACGAATTTCTTGATGAAGT 4352 Query 34370 CATCAAGCAGGTCCTGTAA-CTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTC- 34427 || || || ||| | | ||| || ||| || | |||||| || ||| |||| Sbjct 4351 TCTCGAGAAG-TCCAGCGAGCTTCGAGGTGTCATGAGCGCCGTTCAC-ATGTGAAGTTCC 4294 Query 34428 GTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTA 34487 | |||| | ||||| || || ||||| |||| || || || |||||||| || |||| Sbjct 4293 GGTTTTCTCATCGAACTTCGACTGCGCTCCCAATTCACAGCCAAAGTACTTCGT--GGTA 4236 Query 34488 AATG--GCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTG 34545 | | || || | || || ||||| ||||||||| ||| || |||| | |||||| Sbjct 4235 TACGAAGCGGGCCTGCCGAGAGCCTTTGCGATTTCGACCATATTCACGACGTTGGTCTTG 4176 Query 34546 ATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAAC 34605 ||||| || || ||||||| |||| || ||||| ||||| | |||||| Sbjct 4175 ATGCCATTACCACGACCTTCGATTTTGGTTATCATCTTAGGCATCTTGTACCTGTAGAAG 4116 Query 34606 GCGTC 34610 ||||| Sbjct 4115 GCGTC 4111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412787843379212