Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq993 140 2e-28 seq560 86.0 4e-12 >seq993 Length=3989 Score = 140 bits (154), Expect = 2e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | |||||| |||| ||||| |||||||||||||| ||||| || || | Sbjct 3396 TTCCTCCACGAAGCCTCAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAG 3455 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 || | || |||| ||||| ||||| ||||||||||| || | ||||| ||| ||| Sbjct 3456 CGAGTGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCTGGCG 3515 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || |||||||| | || || |||||| | |||| || | |||| Sbjct 3516 GGATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATCGTATCCGAGCTTTCGA 3575 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | || | ||||||||| || || ||||||||||| ||||| ||||||||| Sbjct 3576 CTTCCAAGGTTATGGTTTTCCCGGTGAGGGTCTTCACAAATATCTGCATG 3625 Score = 105 bits (116), Expect = 4e-18 Identities = 157/217 (72%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| ||||| || || | || |||| |||| Sbjct 3641 AGGACTAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGCGAGTGTGCGGCCATCC 3700 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||||||||| ||||||| | |||||||| | || | ||||||||||| Sbjct 3701 TCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCC 3760 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATT-CAT-TG-GC-CTCGACATCAACGGTTAT 34941 | || || || || | | |||||| || || || |||||| || | ||| || Sbjct 3761 TGAATCTTAGCCTTCAC----GTTGTCGATTGTATCTGAGCTCTCGACCTCCAGGGTGAT 3816 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| || || ||||| ||||| || || ||||||||| Sbjct 3817 GGTTTTCCCTGTGAGCGTCTTGACGAAAATCTGCATG 3853 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| ||| |||||||||||||||||| || | || | | |||| Sbjct 3185 AGCACAAGGTGAAGAGTGGACTCCTTCTGAATGTTATAATCTGCAAGAGTCCTTCCATCT 3244 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || || || ||||| | ||||||||| | || | || |||||||| Sbjct 3245 TCCAGCTGCTTCCCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGGATACCTTCCTTGTCT 3304 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| |||||| | || | || | ||| || || | || || ||| Sbjct 3305 TGAATTTTCGCCTTGACGTTGTCGATGGTATCGGAGCTCTCCACCTCCAACGTGATCGTC 3364 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || ||||| || ||||||||||| Sbjct 3365 TTCCCGGTCAGAGTCTTCACGAAGATCTGCAT 3396 >seq560 Length=29322 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| || |||||||| ||||| ||||| | || | || | || Sbjct 29108 AGGACGAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCGAGCGTCCGGCCGTCC 29167 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| |||||||| || || || ||||| || |||| | || ||||| || Sbjct 29168 TCGAGTTGCTTACCGGCGAAAATGAGCCGCTGCTGATCCGGCGGAATTCCTTCCTTATCC 29227 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | |||| || || || || || | || || ||| Sbjct 29228 TGAATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGGATTCAACCTCCAACGTGATCGTC 29287 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| ||||| || || ||||||||||| Sbjct 29288 TTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 29319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325650391133396