Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq4164 100 2e-16 seq993 96.9 3e-15 >seq4164 Length=15189 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || |||||||| || || ||||| || || ||||| || || |||| |||||| Sbjct 215 CGGAGGACCAAATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCG 156 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||| ||||| || || | || | || || || || || || || || ||||| Sbjct 155 TCCTCGAGCTGTTTTCCGGCGAAGATAAGCCTCTGTTGGTCTGGGGGTATTCCTTCTTTA 96 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || ||||| | || | ||||| || ||| || ||||| || ||| Sbjct 95 TCCTGGATCTTGGCCTTGACGTTATCGATTGTGTCGGAGCTTTCAACCTCAAGGGTGATA 36 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| || | ||||| || || |||||||| Sbjct 35 GTTTTGCCGGTGAGAGTTTTCACGAAGATCTGCAT 1 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||| || |||| || || || ||||| || ||||||||||| || || Sbjct 455 CCTCCACGAAGACGGAGGACCAGGTGGAGAGTAGATTCCTTCTGAATGTTATAGTCGGCC 396 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || || ||||| ||||| || || | |||| || || || |||||||| Sbjct 395 AAGGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATCAGCCTCTGTTGGTCCGGCGGG 336 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || ||||| || | || || || | || | ||||| || ||| ||| Sbjct 335 ATACCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCCACT 276 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || || || || || || | |||||| || || || |||||| Sbjct 275 TCTAGGGTGATCGTCTTTCCGGTGAGGGTTTTCACGAAGATTTGCATT 228 >seq993 Length=3989 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| | | ||| ||||| | ||||| ||||| || || |||||||||||||| || Sbjct 3169 TCCTCCACGGAGACGAAGCACAAGGTGAAGAGTGGACTCCTTCTGAATGTTATAATCTGC 3228 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | ||| || || || || |||||| | |||| || ||||| || || || Sbjct 3229 AAGAGTCCTTCCATCTTCCAGCTGCTTCCCAGCAAAAATCAGCCTCTGCTGGTCTGGTGG 3288 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||||| || |||||||| |||||| | ||||| | || | || || || || | Sbjct 3289 GATACCTTCCTTGTCTTG-AATTTTCGCCTTGACGTTGTCGATGGTATCGGAGCTCTCCA 3347 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 | || | || || || || || || | || || || || ||||||||| Sbjct 3348 CCTCCAACGTGATCGTCTTCCCGGTCAGAGTCTTCACGAAGATCTGCATT 3397 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 ||||||||| ||||| ||| || || || ||||| ||||| || | || || ||| Sbjct 3412 CAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGCGAGTGTACGGCCATC 3471 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || || || ||||| || | || | || |||||||| ||||| || || || ||||| Sbjct 3472 CTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCTGGCGGGATGCCTTCCTTGTC 3531 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | || ||||| | || | || || || ||| ||||| | ||||| || Sbjct 3532 CTGGATCTTAGCCTTGACGTTGTCGATCGTATCCGAGCTTTCGACTTCCAAGGTTATGGT 3591 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || | ||| || |||||||||||||| Sbjct 3592 TTTCCCGGTGAGGGTCTTCACAAATATCTGCAT 3624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385169040126444