Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq4462 111 1e-18 seq5945 96.9 3e-14 >seq4462 Length=8952 Score = 111 bits (122), Expect = 1e-18 Identities = 279/420 (66%), Gaps = 8/420 (2%) Strand=Plus/Minus Query 282140 TCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT-ACAAGACGATTATCAAA 282198 ||| | |||| ||||||||||| || | || || ||| || | | ||||| || Sbjct 7564 TCTTTCTTATTCTTTCTCTTGAATTCCTGGAC-CAAGTGGTTCACCATTCTGTTATCGAA 7506 Query 282199 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 282258 |||||| ||||| | | ||||| || | || || | |||| ||| | ||| ||||| Sbjct 7505 ATCTTCGCCTCCGAGGTGAGTATCGCCGGCAGTTGCCTTGACTTCGAAGATTCCTTCTTC 7446 Query 282259 AAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT 282318 | | || |||| ||||| || || || || | || || || || || ||| | Sbjct 7445 GATTGTCAGTAGAGACACATCGAAAGTACCGCCGCCGAGGTCGAAGATGAGGACGTTCTT 7386 Query 282319 TTCTTTGTCT----TGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 || | | | | || ||||| ||||| || |||| |||||| || || || || Sbjct 7385 CTCGCCGACGGCAGTAGCCTTCTTATCCAGACCGTAAGCAATAGCAGCGGCGGTGGGCTC 7326 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432 || || || | || ||| || ||||| ||||| ||| ||||| || || || || | Sbjct 7325 GTTGATGATACGCATAACGTTGAGACCGGCAATGACTCCGGCATCCTTGGTAGCCTGACG 7266 Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAAT 282492 || || ||||||||||| ||||| || || | ||||||| | ||| |||||| Sbjct 7265 CTGAGAGTCGTTAAAATACGCAGGCACGGTCACGACGGCATTCTTAACTGAAGTTCCAAG 7206 Query 282493 ATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGA 282552 ||| || || || | ||||| ||| | | || ||| ||||| || | |||| ||| Sbjct 7205 ATATGCCTCCGCGGTCTCCTTCATCTTAATGAGAACCATGGATGAGATCTCCTCTGCAGA 7146 >seq5945 Length=3495 Score = 96.9 bits (106), Expect = 3e-14 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282356 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 282415 |||||||| || |||||||| || ||||| ||||| || || || |||||||||||| Sbjct 1461 GCAGCAGCGGTAGGTTCATTGATGATTCTTTGAACATCGAGGCCTGCTATTCTTCCTGCA 1520 Query 282416 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCT 282475 || || || ||||| || || | ||| || ||||| || || ||||| || || || | Sbjct 1521 TCCTTCGTTGCTTGCCTCTGGGCATCATTGAAATAGGCCGGGACAGTGATCACAGCTTTA 1580 Query 282476 GTTACTTCTTTTCCAA 282491 ||||| |||||||| Sbjct 1581 GTTACCGATTTTCCAA 1596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740105860750584