Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq993 123 5e-23 seq560 118 2e-21 seq4164 111 3e-19 >seq993 Length=3989 Score = 123 bits (136), Expect = 5e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 82598 CAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTC 82657 ||| || ||||| ||||| || ||||| || || ||||||| || | | || || Sbjct 3412 CAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGCGAGTGTACGGCCATC 3471 Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717 || || || || || || ||||| || || || |||||||| || || |||||||| || Sbjct 3472 CTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCTGGCGGGATGCCTTCCTTGTC 3531 Query 82718 TTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGT 82777 || ||||| || || || || || |||||||| ||| |||||||| ||||| || Sbjct 3532 CTGGATCTTAGCCTTGACGTTGTCGATCGTATCCGAGCTTTCGACTTCCAAGGTTATGGT 3591 Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || | ||||| |||||||||||||| Sbjct 3592 TTTCCCGGTGAGGGTCTTCACAAATATCTGCAT 3624 >seq560 Length=29322 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | ||| ||||| ||||| ||||| || || || || | || | | ||| Sbjct 29105 CGGAGGACGAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCGAGCGTCCGGCCG 29164 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || ||||| || || || || || || | || ||||| || || |||||||||||| Sbjct 29165 TCCTCGAGTTGCTTACCGGCGAAAATGAGCCGCTGCTGATCCGGCGGAATTCCTTCCTTA 29224 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || |||||||| || || || || || ||||| || | ||| || ||||| || ||| Sbjct 29225 TCCTGAATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGGATTCAACCTCCAACGTGATC 29284 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || | || || || || |||||||| Sbjct 29285 GTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 29319 >seq4164 Length=15189 Score = 111 bits (122), Expect = 3e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 |||||| | | ||| || || | ||| ||||||||||| ||||| || ||||| || | Sbjct 456 ACCTCCACGAAGACGGAGGACCAGGTGGAGAGTAGATTCCTTCTGAATGTTATAGTCGGC 397 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | | ||||| || || |||||||| || ||||| || || ||||| || || || Sbjct 396 CAAGGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATCAGCCTCTGTTGGTCCGGCGG 337 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || |||||||| || || ||||| || || || || || || || || ||| || Sbjct 336 GATACCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCCAC 277 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||| | || |||||||| || || | || || || || || |||||| Sbjct 276 TTCTAGGGTGATCGTCTTTCCGGTGAGGGTTTTCACGAAGATTTGCATT 228 Score = 104 bits (114), Expect = 5e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || || || || || ||||| ||||| || || || || | || | | ||| Sbjct 215 CGGAGGACCAAATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCG 156 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || |||||||| || ||||| || || ||||| ||||| ||||||||||| ||| Sbjct 155 TCCTCGAGCTGTTTTCCGGCGAAGATAAGCCTCTGTTGGTCTGGGGGTATTCCTTCTTTA 96 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || ||||| || || || || || || || || ||| || || | || || Sbjct 95 TCCTGGATCTTGGCCTTGACGTTATCGATTGTGTCGGAGCTTTCAACCTCAAGGGTGATA 36 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| || | || || || || |||||||| Sbjct 35 GTTTTGCCGGTGAGAGTTTTCACGAAGATCTGCAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981692798901876