Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq9369 109 8e-19 seq10276 107 3e-18 seq9877 96.9 5e-15 seq9368 93.3 6e-14 >seq9369 Length=1187 Score = 109 bits (120), Expect = 8e-19 Identities = 180/255 (71%), Gaps = 30/255 (12%) Strand=Plus/Plus Query 142735 GAACAGGCAAGGTTGATGAAAACGGTCAAAATT----------CAGTAAAAT-------G 142777 ||||||||||||||| |||||||||||||| || ||| ||| | Sbjct 549 GAACAGGCAAGGTTGGTGAAAACGGTCAAAGTTTTGACAAGGGCAGCTAAACCCTTTCAG 608 Query 142778 GACAAGACCGTCGGTG-TAGCTAAAGGGTAACCTTTAGTGAT-ATCGCTATCGACTGGGT 142835 || ||||||||||| || | | | |||||| | | | ||||||||||||||||| Sbjct 609 GATCAGACCGTCGGTTCTAAC-ATATGGTAACATATGCCAAGGATCGCTATCGACTGGGT 667 Query 142836 CATCAATCGGTCACCCTTATTTTA--AGGGAGGCTCAATGTACAGTCAGGCCACCATAAG 142893 || | |||||||| || ||| | ||| |||||||||||||||||||||||| || Sbjct 668 CACCGATCGGTCATCC-TATGAGAATAGGAAGGCTCAATGTACAGTCAGGCCACTGTA-- 724 Query 142894 GATCCTTTATAACCAGGGATACGAGTGGTGCTCATGTGATCGAGCGAATTGAAAATTGAA 142953 | ||||| | ||| ||| ||| |||||||||| ||||| |||||| ||| Sbjct 725 -ACCCTTTGCTAGTAGG----AGAGCAGTGATCATGTGATCAGGCGAAATGAAAAGTGAC 779 Query 142954 ACTCGGGAAGCATGG 142968 | ||||||||||| Sbjct 780 GCCTGGGAAGCATGG 794 >seq10276 Length=2721 Score = 107 bits (118), Expect = 3e-18 Identities = 178/253 (70%), Gaps = 28/253 (11%) Strand=Plus/Plus Query 142735 GAACAGGCAAGGTTGATGAAAACGGTCAAAATTC----------AGTAAAAT-------G 142777 ||||||||||||| | |||||||||||||| || || |||| | Sbjct 2351 GAACAGGCAAGGTCGGTGAAAACGGTCAAAGTTTTGATAAGGGAAGCAAAACCCTTTCAG 2410 Query 142778 GACAAGACCGTCGGTG-TAGCTAAAGGGTAACCTTTAGTGAT-ATCGCTATCGACTGGGT 142835 || ||||||||||| || | | | |||||| | | | ||||||||||||||||| Sbjct 2411 GATCAGACCGTCGGTTCTAAC-ATATGGTAACATATGCCAAGGATCGCTATCGACTGGGT 2469 Query 142836 CATCAATCGGTCACCCT-TATTTTAAGGGAGGCTCAATGTACAGTCAGGCCACCATAAGG 142894 || | |||||||| ||| ||| ||| |||||||||||||||||||||||| || Sbjct 2470 CACCGATCGGTCATCCTATATAAATAGGAAGGCTCAATGTACAGTCAGGCCACTGTA--- 2526 Query 142895 ATCCTTTATAACCAGGGATACGAGTGGTGCTCATGTGATCGAGCGAATTGAAAATTGAAA 142954 | ||||| | ||| ||| ||| |||||||||| | ||| |||||| ||| | Sbjct 2527 ACCCTTTGCTAGTAGG----AGAGCAGTGATCATGTGATCAGGTGAAATGAAAAGTGACA 2582 Query 142955 CTCGGGAAGCATG 142967 | |||||||||| Sbjct 2583 CCTGGGAAGCATG 2595 >seq9877 Length=2571 Score = 96.9 bits (106), Expect = 5e-15 Identities = 140/194 (72%), Gaps = 9/194 (5%) Strand=Plus/Minus Query 142782 AGACCGTCGGTGTAGCTAAAGGGTAACCTTTAGTGAT-ATCGCTATCGACTGGGTCATCA 142840 ||||||||||| | | |||||||| | | ||| ||||||||||||||||||| | Sbjct 2546 AGACCGTCGGTTCTCCCACAGGGTAACTTGTGATGAGGATCGCTATCGACTGGGTCACCG 2487 Query 142841 ATCGGTCACCCTTATTTTA----AGGGAGGCTCAATGTACAGTCAGGCCACCATAAGGAT 142896 ||||| ||| | | ||| |||| ||||||||||||||| ||| ||| Sbjct 2486 GTCGGTTGTCCTCAACAAATCAGAGGATGGCTTAATGTACAGTCAGGCTACCGTAACCC- 2428 Query 142897 CCTTTATAACCAGGGATACGAGTGGTGCTCATGTGATCGAGCGAATTGAAAATTGAAACT 142956 ||||| | |||| ||| ||| | |||||||||| | |||||||||||| || Sbjct 2427 CCTTTGCTAGTGGGGA---GAGCGGTACCCATGTGATCGGGTTGATTGAAAATTGACACC 2371 Query 142957 CGGGAAGCATGGGA 142970 |||||||||||||| Sbjct 2370 CGGGAAGCATGGGA 2357 >seq9368 Length=4880 Score = 93.3 bits (102), Expect = 6e-14 Identities = 115/155 (74%), Gaps = 13/155 (8%) Strand=Plus/Plus Query 142819 ATCGCTATCGACTGGGTCATCAATCGGTCACCCT----TATTTT--AAGGGAGGCTCAAT 142872 ||||||||||||||||||| | |||||||| ||| || | | ||| ||||||||| Sbjct 8 ATCGCTATCGACTGGGTCACCGATCGGTCATCCTGGAATACTATCACAGGAAGGCTCAAT 67 Query 142873 GTACAGTCAGGCCACCATAAGGATCCTTTATAACCAGGGATACGAGTGGTGCTCATGTGA 142932 ||||||||||||||| || | ||||| | ||| ||| ||| |||||||| Sbjct 68 GTACAGTCAGGCCACTGTA---ACCCTTTGCTAGTAGG----AGAGCAGTGATCATGTGA 120 Query 142933 TCGAGCGAATTGAAAATTGAAACTCGGGAAGCATG 142967 || ||||||||||||||| |||||||||| Sbjct 121 TCAGATGAATTGAAAATTGAAGTCTGGGAAGCATG 155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 704488303020480