Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq560 105 4e-18 seq993 89.7 3e-13 >seq560 Length=29322 Score = 105 bits (116), Expect = 4e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || |||||||| |||| ||| || || |||| || | ||| || ||||| ||| Sbjct 29129 TCCTTCTGGATGTTGTAGTCGGCGAGCGTCCGGCCGTCCTCGAGTTGCTTACCGGCGAAA 29188 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | ||||||||||| |||| | ||||| || || ||| ||| ||| || | Sbjct 29189 ATGAGCCGCTGCTGATCCGGCGGAATTCCTTCCTTATCCTGAATCTTCGCCTTC-ACGTT 29247 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| | |||||| ||||| || || | ||||||||| || || |||| ||||| || Sbjct 29248 GTCGATCGTGTCGGAGGATTCAACCTCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCAC 29307 Query 33738 AAAGATCTGCAT 33749 ||||||||||| Sbjct 29308 GAAGATCTGCAT 29319 >seq993 Length=3989 Score = 89.7 bits (98), Expect = 3e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 |||||| || ||||||||||| || || ||||||||||| | |||||| || | || || Sbjct 3415 CACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGCGAGTGTACGGCCATCCTC 3474 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656 || || || ||||| || || | | |||||||||| |||| | ||||| ||||| Sbjct 3475 CAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCTGGCGGGATGCCTTCCTTGTC 3531 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | ||| | || |||||| ||| || || ||||| ||||| | || || | | | Sbjct 3181 ACGAAGCACAAGGTGAAGAGTGGACTCCTTCTGAATGTTATAATCTGCAAGAGTCCTTCC 3240 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || |||| || || || |||||||||| | |||||| ||| | || | |||||| || Sbjct 3241 ATCTTCCAGCTGCTTCCCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGGATACCTTCCTT 3300 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| ||||||| || | | | ||| | ||| ||| ||||| || | ||||| Sbjct 3301 GTCTTGAATTTTCGCCTTGA-CGTTGTCGATGGTATCGGAGCTCTCCACCTCCAACGTGA 3359 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || || | || || || ||||||||||| Sbjct 3360 TCGTCTTCCCGGTCAGAGTCTTCACGAAGATCTGCAT 3396 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/207 (71%), Gaps = 8/207 (4%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || |||||| ||| || || ||||||||||| | ||||||||| | || |||| || Sbjct 3650 TGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGCGAGTGTGCGGCCATCCTCCAGCTGC 3709 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 ||||||||||| ||||| | |||||| || | || | ||| || ||||| ||| || Sbjct 3710 TTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGAATCTTA 3769 Query 33667 TGTTTCAACATAGTC-ACGGTGTC---GCTTGATTCCACGTCAACCGTGATCGTTTTACC 33722 ||| || | ||| | || || ||| || || || | ||||| ||||| || Sbjct 3770 GCCTTC-ACGTTGTCGATTGTATCTGAGCT---CTCGACCTCCAGGGTGATGGTTTTCCC 3825 Query 33723 TGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| | ||| || || || |||||||| Sbjct 3826 TGTGAGCGTCTTGACGAAAATCTGCAT 3852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328661199041280