Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq4164 134 3e-26 seq993 125 2e-23 seq560 111 4e-19 >seq4164 Length=15189 Score = 134 bits (148), Expect = 3e-26 Identities = 146/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| ||||| |||||||| | ||||||||||| || ||||| |||| Sbjct 244 AAAACCCTCACCGGAAAGACGATCACCCTAGAAGTGGAAAGCTCCGACACCATCGACAAC 303 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || ||||| || ||||||| || || || |||||| Sbjct 304 GTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGACCAACAGAGGCTGATCTTC 363 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||| ||| | || || || |||| |||||||| || ||| | ||||| || ||| Sbjct 364 GCCGGAAAACAGCTCGAGGACGGCCGGACCTTGGCCGACTATAACATTCAGAAGGAATCT 423 Query 206365 ACTCTTCACCTTGT 206378 ||||| ||||| || Sbjct 424 ACTCTCCACCTGGT 437 Score = 109 bits (120), Expect = 1e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || ||||| ||||| | || || ||||| || |||||| |||| Sbjct 16 AAAACTCTCACCGGCAAAACTATCACCCTTGAGGTTGAAAGCTCCGACACAATCGATAAC 75 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || ||||||||||| || ||| || || ||||||||| Sbjct 76 GTCAAGGCCAAGATCCAGGATAAAGAAGGAATACCCCCAGACCAACAGAGGCTTATCTTC 135 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||| ||| | || || || | || | ||||| |||||| ||||||| || || Sbjct 136 GCCGGAAAACAGCTCGAGGACGGCCGCACCCTTGCCGACTACAACATCCAGAAGGAATCG 195 Query 206365 ACTCTTCA 206372 || || || Sbjct 196 ACCCTCCA 203 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 || ||||| |||||||| || ||||| | |||||||| ||||| |||| || || || Sbjct 437 ACCAGGTGGAGAGTAGATTCCTTCTGAATGTTATAGTCGGCCAAGGTCCGGCCGTCCTCG 378 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||| |||||||||||||| |||| ||||| Sbjct 377 AGCTGTTTTCCGGCGAAGATCAGCCTCTGTTG 346 >seq993 Length=3989 Score = 125 bits (138), Expect = 2e-23 Identities = 144/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || |||||||| ||||| ||||| || || || || |||| Sbjct 3381 AAGACTCTGACCGGGAAGACGATCACGTTGGAGGTGGAGAGCTCCGATACCATCGACAAC 3322 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || |||||||| || ||||| || || ||| || || || || || Sbjct 3321 GTCAAGGCGAAAATTCAAGACAAGGAAGGTATCCCACCAGACCAGCAGAGGCTGATTTTT 3262 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| ||||||||||||||||| | || ||||| ||| | ||||| ||||| Sbjct 3261 GCTGGGAAGCAGCTGGAAGATGGAAGGACTCTTGCAGATTATAACATTCAGAAGGAGTCC 3202 Query 206365 ACTCTTCACCTTGT 206378 |||||||||||||| Sbjct 3201 ACTCTTCACCTTGT 3188 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || ||||| || ||||| || || |||||||| ||||| || || Sbjct 3621 CAGATATTTGTGAAGACCCTCACCGGGAAAACCATAACCTTGGAAGTCGAAAGCTCGGAT 3562 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || ||||| || ||| || || Sbjct 3561 ACGATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCGCCAGATCAGCAG 3502 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||||||||| |||||| |||| ||||| | || | || ||||||||| || Sbjct 3501 AGGCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACACTCGCTGATTACAACATC 3442 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||| ||||||||| | || |||| ||||| Sbjct 3441 CAGAAGGAGAGCACTCTTCACTTGGTGCTGAGGCTTCG 3404 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| ||||||||||| ||||| ||||| |||| || || || || || Sbjct 3849 CAGATTTTCGTCAAGACGCTCACAGGGAAAACCATCACCCTGGAGGTCGAGAGCTCAGAT 3790 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| |||| || ||| |||||||| || || || || || |||||| || Sbjct 3789 ACAATCGACAACGTGAAGGCTAAGATTCAGGACAAGGAGGGTATCCCACCGGACCAGCAG 3730 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||| |||||||||||| |||| ||||| | || | || ||||||||| || Sbjct 3729 AGGTTGATCTTTGCCGGAAAGCAGCTGGAGGATGGCCGCACACTCGCTGATTACAACATC 3670 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| ||||| ||||| || Sbjct 3669 CAGAAGGAGTCCACTCTCCACCTAGT 3644 Score = 91.5 bits (100), Expect = 3e-13 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 |||||||||||||| ||||| ||||| | ||||| || || | |||||||||||||||| Sbjct 3188 ACAAGGTGAAGAGTGGACTCCTTCTGAATGTTATAATCTGCAAGAGTCCTTCCATCTTCC 3247 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCC 204848 |||||||| || || || || |||| Sbjct 3248 AGCTGCTTCCCAGCAAAAATCAGCC 3272 >seq560 Length=29322 Score = 111 bits (122), Expect = 4e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || |||||||| ||||| || ||| || ||||| |||| Sbjct 29304 AAAACCCTAACGGGGAAGACGATCACGTTGGAGGTTGAATCCTCCGACACGATCGACAAC 29245 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || ||||||||| |||||| || | || || ||| Sbjct 29244 GTGAAGGCGAAGATTCAGGATAAGGAAGGAATTCCGCCGGATCAGCAGCGGCTCATTTTC 29185 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| ||||| | || || || |||| | ||||| |||||| ||||||| || || Sbjct 29184 GCCGGTAAGCAACTCGAGGACGGCCGGACGCTCGCCGACTACAACATCCAGAAGGAATCG 29125 Query 206365 ACTCTTCACCTTGT 206378 ||||||||||| || Sbjct 29124 ACTCTTCACCTCGT 29111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181659022027964