Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq4164 125 6e-24 seq560 104 2e-17 >seq4164 Length=15189 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | || | |||||||| | || || || || || || ||||||||| Sbjct 227 CCGCCGCGGAGGCGGAGGACCAAATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCA 168 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| |||| ||||||||||| |||||| | || || | |||||| || || || Sbjct 167 AGGGTGCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATAAGCCTCTGTTGGTCTGGGGGT 108 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || |||||||| ||||||| || | | | || | ||||| | | |||||| Sbjct 107 ATTCCTTCTTTATCCTGGATCTTGGCCTTGACGTTATCGATTGTGTCGGAGCTTTCAACC 48 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || |||| |||||| || ||||||||||| ||||| ||||| Sbjct 47 TCAAGGGTGATAGTTTTGCCGGTGAGAGTTTTCACGAAGATCTGCAT 1 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || ||||| || |||||| || | | || |||| ||||||||||| ||| Sbjct 425 GTAGATTCCTTCTGAATGTTATAGTCGGCCAAGGTCCGGCCGTCCTCGAGCTGTTTTCCG 366 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || || | |||||| |||||||| | ||| || || || ||||||| ||| Sbjct 365 GCGAAGATCAGCCTCTGTTGGTCCGGCGGGATACCTTCCTTGTCCTGGATCTTGGCCTTC 306 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | ||| |||||||| || || | || || || || ||| Sbjct 305 ACGTTGTCGATGGTGTCGGAGCTTTCCACTTCTAGGGTGATCGTCTTTCCGGTGAGGGTT 246 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||||||||| Sbjct 245 TTCACGAAGATTTGCAT 229 >seq560 Length=29322 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | || |||| ||||| || |||||| Sbjct 29123 GTCGATTCCTTCTGGATGTTGTAGTCGGCGAGCGTCCGGCCGTCCTCGAGTTGCTTACCG 29182 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| ||||||| ||||| ||||||||||| | || || ||||| ||||| ||| Sbjct 29183 GCGAAAATGAGCCGCTGCTGATCCGGCGGAATTCCTTCCTTATCCTGAATCTTCGCCTTC 29242 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | || |||||| || | || || | || ||||| || ||| Sbjct 29243 ACGTTGTCGATCGTGTCGGAGGATTCAACCTCCAACGTGATCGTCTTCCCCGTTAGGGTT 29302 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| Sbjct 29303 TTCACGAAGATCTGCAT 29319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424879068760608