Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq560 158 1e-33 seq993 156 5e-33 seq4164 131 2e-25 seq2923 114 1e-20 seq3882 82.4 9e-11 >seq560 Length=29322 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || || || ||||| || || | |||||||| || Sbjct 29319 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGTTGAATCCTCC 29260 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || ||||||| || |||||||| ||||| |||||||| || || ||| Sbjct 29259 GACACGATCGACAACGTGAAGGCGAAGATTCAGGATAAGGAAGGAATTCCGCCGGATCAG 29200 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| || ||||||||||||||||| | || || || || ||||| || Sbjct 29199 CAGCGGCTCATTTTCGCCGGTAAGCAACTCGAGGACGGCCGGACGCTCGCCGACTACAAC 29140 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| |||||||| || ||| | || || ||||| || Sbjct 29139 ATCCAGAAGGAATCGACTCTTCACCTCGTCCTCCGCCTCCGCGGCGG 29093 >seq993 Length=3989 Score = 156 bits (172), Expect = 5e-33 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || ||||||||||| || || || || || || || ||||| ||| || | Sbjct 3852 ATGCAGATTTTCGTCAAGACGCTCACAGGGAAAACCATCACCCTGGAGGTCGAG--AGCT 3795 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| || | || |||||||||| ||||||||||||||||| || || || |||| Sbjct 3794 CAGATACAATCGACAACGTGAAGGCTAAGATTCAGGACAAGGAGGGTATCCCACCGGACC 3735 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | || ||||| || ||||| || ||||||| || || || || || || | Sbjct 3734 AGCAGAGGTTGATCTTTGCCGGAAAGCAGCTGGAGGATGGCCGCACACTCGCTGATTACA 3675 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||||| |||||||| || |||||| | ||||| || ||||| Sbjct 3674 ACATCCAGAAGGAGTCCACTCTCCACCTAGTCCTCCGTCTCCGTGGTGG 3626 Score = 154 bits (170), Expect = 2e-32 Identities = 174/231 (75%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| || ||||| ||||| || || | ||||| ||| || Sbjct 3397 AATGCAGATCTTCGTGAAGACTCTGACCGGGAAGACGATCACGTTGGAGGTGGAG--AGC 3340 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | |||| ||| | || | ||||| |||||||| |||||||| || || || |||||| Sbjct 3339 TCCGATACCATCGACAACGTCAAGGCGAAAATTCAAGACAAGGAAGGTATCCCACCAGAC 3280 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||| | || ||||||||||| ||||| || || |||| | || || ||||| ||| Sbjct 3279 CAGCAGAGGCTGATTTTTGCTGGGAAGCAGCTGGAAGATGGAAGGACTCTTGCAGATTAT 3220 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || | || ||||| ||||||||||| || || | ||||| || || ||| Sbjct 3219 AACATTCAGAAGGAGTCCACTCTTCACCTTGTGCTTCGTCTCCGTGGAGGA 3169 Score = 113 bits (124), Expect = 5e-20 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| || ||||| || || || || | || || || || | Sbjct 3624 ATGCAGATATTTGTGAAGACCCTCACCGGGAAAACCATAACCTTGGAAGTCGAA--AGCT 3567 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| || | || | |||||||| || ||||||||||| || || || ||||| | Sbjct 3566 CGGATACGATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCGCCAGATC 3507 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || || || || ||||| || ||||||| ||||| || || || || | Sbjct 3506 AGCAGAGGCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACACTCGCTGATTACA 3447 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||| ||||| ||||||||| | || || | ||||| || ||| Sbjct 3446 ACATCCAGAAGGAGAGCACTCTTCACTTGGTGCTGAGGCTTCGTGGAGGA 3397 >seq4164 Length=15189 Score = 131 bits (144), Expect = 2e-25 Identities = 168/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || |||||||| ||||| || ||||||||||| || | Sbjct 1 ATGCAGATCTTCGTGAAAACTCTCACCGGCAAAACTATCACCCTTGAGGTTGA--AAGCT 58 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | || | || | ||||| || || ||||| || || ||||| || ||||||| Sbjct 59 CCGACACAATCGATAACGTCAAGGCCAAGATCCAGGATAAAGAAGGAATACCCCCAGACC 118 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 | ||| | || || || || || || || |||||||| | || ||||| || ||||| | Sbjct 119 AACAGAGGCTTATCTTCGCCGGAAAACAGCTCGAGGACGGCCGCACCCTTGCCGACTACA 178 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||| |||||||| || || ||| | ||| | || || ||||| ||| Sbjct 179 ACATCCAGAAGGAATCGACCCTCCATTTGGTCCTCCGCCTCCGCGGCGGA 228 Score = 131 bits (144), Expect = 2e-25 Identities = 168/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||| || || || || ||||| ||||| || || || || || || || Sbjct 228 AATGCAAATCTTCGTGAAAACCCTCACCGGAAAGACGATCACCCTAGAAGTGGAA--AGC 285 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | ||| | || ||||||| || || ||||||||||| || || || || ||| Sbjct 286 TCCGACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGAC 345 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || ||| | || || || || || || || |||||||| | || ||| | || |||||| Sbjct 346 CAACAGAGGCTGATCTTCGCCGGAAAACAGCTCGAGGACGGCCGGACCTTGGCCGACTAT 405 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | || |||||||| ||||| || || ||| | |||||||| || || Sbjct 406 AACATTCAGAAGGAATCTACTCTCCACCTGGTCCTCCGTCTTCGTGGAGG 455 >seq2923 Length=6118 Score = 114 bits (126), Expect = 1e-20 Identities = 165/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||| | || || || || || | || ||||| || ||||| ||| || Sbjct 4279 AATGCAAATCTTCGCGAAAACCCTGACGGGGGAAACGATTACGCTGGAGGTAGAG--AGC 4336 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | ||| | | | || ||||| | || |||||| ||||||| |||||||| || Sbjct 4337 TCCGATTCCGTCGATCATGTGAAGTCGAAGATTCAGCACAAGGAATCGATTCCTCCGGAT 4396 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || ||||| | ||||| || || || || || ||||| | | | | || || ||||| Sbjct 4397 CAACAGCGGTTGATTTTCGCCGGCAAACAGCTGGAGGACGGTAGATCTCTGGCCGACTAC 4456 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||||||| |||||||| ||||| ||||| || | || || ||||| ||| Sbjct 4457 AATGTCCAGAAGGAATCGACTCTGCATCTCGTTCTTCGACTGCGCGGCGGA 4507 >seq3882 Length=2978 Score = 82.4 bits (90), Expect = 9e-11 Identities = 156/225 (69%), Gaps = 10/225 (4%) Strand=Plus/Plus Query 64933 GCTGTAGAAATTGAAAAGGAATTCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATG 64992 || || || ||||| ||||||| | | || || |||||| |||| ||||||||| Sbjct 1470 GCCGTCGATATTGAGCGGGAATTCGTGTGCGATGCTCTGCCGTGTGGTCTGATCGGCATG 1529 Query 64993 GATGCCGATAAGATGAAACAGTATATCGAATTTGTAGCAGATCGCCTGCTTACTCAGTTT 65052 | ||| ||||| |||||||||||||| |||| ||||| |||| | | | || Sbjct 1530 AACTGAGATCTGATGAGTCAGTATATCGAATTCATAGCGGATCGTTTGCTGATTTCG-TT 1588 Query 65053 GGTAT----TAAGCCCTACTGGAATTCTTCAAATCCATTTGACTGGATGGAGACGATCAG 65108 || || |||| |||| | | | ||||| |||| |||||||||| ||| || Sbjct 1589 GGGATGCGATAAGATCTACGG---TGCGATGAATCC-GTTGATTGGATGGAGATGATTAG 1644 Query 65109 CCTGGAGGGGAAGACTAACTTTTTTGAAAAGAGGGTAGGTGATTA 65153 | ||| |||||||| || || || || ||||| || | ||||| Sbjct 1645 CTTGG-TGGGAAGACGAATTTCTTCGAGAAGAGAGTCAGCGATTA 1688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570234235046080