Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq993 118 7e-22 seq4164 111 1e-19 >seq993 Length=3989 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| | || |||||| || |||||||||||||| || ||||| ||||| | Sbjct 3398 CCTCCACGAAGCCTCAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGCG 3457 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 ||||| || | || || || || || ||||| || || | | ||| || || ||||| Sbjct 3458 AGTGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCTGGCGGG 3517 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| |||| || | || ||| | || || || ||| || || Sbjct 3518 ATGCCTTCCTTGTCCTGGATC-TTAGCCTTGACGTTGTCGATCGTATCCGAGCTTTCGAC 3576 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||||| |||||| ||||| ||||| | || |||||||| ||||||||| Sbjct 3577 TTCCAAGGTTATGGTTTTCCCGGTGAGGGTCTTCACAAATATCTGCATG 3625 Score = 114 bits (126), Expect = 8e-21 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||||||| |||||| || ||||| ||||| | ||||| || | || || || || Sbjct 3650 TGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGCGAGTGTGCGGCCATCCTCCAGCTGC 3709 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || |||||||| || || | ||| |||||||| || | ||||||||||| ||| || Sbjct 3710 TTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCCTTGTC-CTGAATCTT 3768 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | ||||| ||| |||||| || |||| ||| || ||||| || || Sbjct 3769 AGCCTTCACGTTGTCGATTGTATCTGAGCTCTCGACCTCCAGGGTGATGGTTTTCCCTGT 3828 Query 34683 TAACGTTTTCACAAAAATCTGCATG 34707 | ||| || || |||||||||||| Sbjct 3829 GAGCGTCTTGACGAAAATCTGCATG 3853 Score = 109 bits (120), Expect = 3e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||| | || |||||| |||||| |||||||||||||||| ||| || | Sbjct 3179 AGACGAAGCACAAGGTGAAGAGTGGACTCCTTCTGAATGTTATAATCTGCAAGAGTCCTT 3238 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| || || || || ||||| || | | ||| ||||| || || | || ||| Sbjct 3239 CCATCTTCCAGCTGCTTCCCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGGATACCTTCC 3298 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| ||| ||| | || ||| | || || || ||||||||| |||| || Sbjct 3299 TTGTCT-TGAATTTTCGCCTTGACGTTGTCGATGGTATCGGAGCTCTCCACCTCCAACGT 3357 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || ||||| | || ||||| || |||||||| Sbjct 3358 GATCGTCTTCCCGGTCAGAGTCTTCACGAAGATCTGCAT 3396 >seq4164 Length=15189 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | |||| |||||||| ||||| ||||||||||| || | Sbjct 455 CCTCCACGAAGACGGAGGACCAGGTGGAGAGTAGATTCCTTCTGAATGTTATAGTCGGCC 396 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || |||| || || ||||| ||||| || || | | ||||||||||||||| Sbjct 395 AAGGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATCAGCCTCTGTTGGTCCGGCGGG 336 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| |||| || | || ||| | || ||||| ||| ||||| Sbjct 335 ATACCTTCCTTGTCCTGGATC-TTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCCAC 277 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | ||| ||||| || ||||| | |||||||| || || ||||| Sbjct 276 TTCTAGGGTGATCGTCTTTCCGGTGAGGGTTTTCACGAAGATTTGCAT 229 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | || || | ||||||||||| || ||||| || ||||| || || | | Sbjct 227 CCGCCGCGGAGGCGGAGGACCAAATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCA 168 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| || || ||||| ||||| || || | | ||||||||| || || Sbjct 167 AGGGTGCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATAAGCCTCTGTTGGTCTGGGGGT 108 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | ||| || || || |||| || | || ||| || |||||||| ||| || || Sbjct 107 ATTCCTTCTTTATCCTGGATC-TTGGCCTTGACGTTATCGATTGTGTCGGAGCTTTCAAC 49 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || ||||| ||||| | |||||||| || |||||||| Sbjct 48 CTCAAGGGTGATAGTTTTGCCGGTGAGAGTTTTCACGAAGATCTGCAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314688618665372