Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq993 192 1e-43 seq4164 183 7e-41 seq560 163 7e-35 seq1098 93.3 1e-13 >seq993 Length=3989 Score = 192 bits (212), Expect = 1e-43 Identities = 178/226 (79%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | || |||||||||||||||||||| || || ||||||||||| ||||| Sbjct 3172 TCCACGGAGACGAAGCACAAGGTGAAGAGTGGACTCCTTCTGAATGTTATAATCTGCAAG 3231 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||||||||||||||||||||||| || || || || || | || ||||| || || | Sbjct 3232 AGTCCTTCCATCTTCCAGCTGCTTCCCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGGAT 3291 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||||||||||| || || || || ||||| |||||||| || ||||| || ||||| Sbjct 3292 ACCTTCCTTGTCTTGAATTTTCGCCTTGACGTTGTCGATGGTATCGGAGCTCTCCACCTC 3351 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 | ||||||||||| || || |||||||| || || | ||||||| Sbjct 3352 CAACGTGATCGTCTTCCCGGTCAGAGTCTTCACGAAGATCTGCATT 3397 Score = 167 bits (184), Expect = 5e-36 Identities = 172/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||| || || || | |||||||||| ||| || |||||||| ||||| || || Sbjct 3400 TCCACGAAGCCTCAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGCGAG 3459 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | ||||| |||||||||||||| |||||||| || | || || || || || | Sbjct 3460 TGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCTGGCGGGAT 3519 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 |||||||||||||||||||| || ||||| ||||| || || |||||||| || || Sbjct 3520 GCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATCGTATCCGAGCTTTCGACTTC 3579 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | || || || || || ||||| ||||| ||||| | |||||| Sbjct 3580 CAAGGTTATGGTTTTCCCGGTGAGGGTCTTCACAAATATCTGCAT 3624 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||||||||| || |||||||| ||||| || || || | ||||| Sbjct 3641 AGGACTAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGCGAGTGTGCGGCCATCC 3700 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || ||||| | | || ||||| || || | || ||||||||| Sbjct 3701 TCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCC 3760 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| |||||||| ||||| || || ||||| || ||||| || ||||| || Sbjct 3761 TGAATCTTAGCCTTCACGTTGTCGATTGTATCTGAGCTCTCGACCTCCAGGGTGATGGTT 3820 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 3821 TTCCCTGTGAGCGTCTTGACGAAAATCTGCAT 3852 Score = 114 bits (126), Expect = 3e-20 Identities = 104/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| || || ||||||||||| ||||||||||| || || |||||||| Sbjct 3859 ACGAAGACGGAGGACTAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGGGT 3918 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || ||||||||||| |||||||| || | || || || || |||| || Sbjct 3919 GCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCTGGGGGAATGCC 3978 Query 211013 TTCCTTGTCCT 211023 ||| ||||||| Sbjct 3979 TTCTTTGTCCT 3989 >seq4164 Length=15189 Score = 183 bits (202), Expect = 7e-41 Identities = 176/226 (78%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||| | ||||| ||||| ||||| || || || || |||||||| || || | Sbjct 453 TCCACGAAGACGGAGGACCAGGTGGAGAGTAGATTCCTTCTGAATGTTATAGTCGGCCAA 394 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||||| || || || ||||| || || |||||||| || | |||||||| || || | Sbjct 393 GGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATCAGCCTCTGTTGGTCCGGCGGGAT 334 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 |||||||||||||||||||| |||||||| ||||||||||| |||||||| || || Sbjct 333 ACCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCCACTTC 274 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || |||||||||||||| ||||| || || || || | |||||| Sbjct 273 TAGGGTGATCGTCTTTCCGGTGAGGGTTTTCACGAAGATTTGCATT 228 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | || || || || || || |||||||| || || |||||||| | || || Sbjct 212 AGGACCAAATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCC 153 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| || || ||||||||||| | |||||||| || || | |||||| || ||| Sbjct 152 TCGAGCTGTTTTCCGGCGAAGATAAGCCTCTGTTGGTCTGGGGGTATTCCTTCTTTATCC 93 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| |||||||||||||| || ||||| || Sbjct 92 TGGATCTTGGCCTTGACGTTATCGATTGTGTCGGAGCTTTCAACCTCAAGGGTGATAGTT 33 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || |||||||| || || || | |||||| Sbjct 32 TTGCCGGTGAGAGTTTTCACGAAGATCTGCAT 1 >seq560 Length=29322 Score = 163 bits (180), Expect = 7e-35 Identities = 165/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||||||||| || || || |||||||| || || || || |||| || || Sbjct 29108 AGGACGAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCGAGCGTCCGGCCGTCC 29167 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || ||||| || || || || || || || |||| ||||||||| ||| Sbjct 29168 TCGAGTTGCTTACCGGCGAAAATGAGCCGCTGCTGATCCGGCGGAATTCCTTCCTTATCC 29227 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| |||||||| ||||| ||||| ||| ||||||||| | ||||||||| Sbjct 29228 TGAATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGGATTCAACCTCCAACGTGATCGTC 29287 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| || || || || || | |||||| || Sbjct 29288 TTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 29322 >seq1098 Length=28529 Score = 93.3 bits (102), Expect = 1e-13 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 210925 CTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGA 210984 ||||||||||||||||||| ||||| || || |||||||| |||||||| || ||||||| Sbjct 19865 CTTTTTGGATGTTATAATCGGCAAGTGTTCTGCCATCTTCGAGCTGCTTTCCGGCGAAGA 19924 Query 210985 TAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | | || || || || ||||||| |||| Sbjct 19925 TCAAACGCTGCTGATCCGGAGGAATTCCT 19953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158993325131660