Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq4164 96.9 2e-15 seq993 89.7 3e-13 >seq4164 Length=15189 Score = 96.9 bits (106), Expect = 2e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || ||||| ||||||||||| ||||| |||||||| || ||||| || | | Sbjct 228 AATGCAAATCTTCGTGAAAACCCTCACCGGAAAGACGATCACCCTAGAAGTGGAAAGCTC 287 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || || || ||||| |||||| | ||||| || || Sbjct 288 CGACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGACCA 347 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || || ||||| ||||| || || |||| || || || | ||| || || Sbjct 348 ACAGAGGCTGATCTTCGCCGGAAAACAGCTCGAGGACGGCCGGACCTTGGCCGACTATAA 407 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || || || || Sbjct 408 CATTCAGAAGGAATCTAC 425 >seq993 Length=3989 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || ||||| || ||||| ||||| || || || || | | Sbjct 3852 ATGCAGATTTTCGTCAAGACGCTCACAGGGAAAACCATCACCCTGGAGGTCGAGAGCTCA 3793 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | | || || ||| ||||| || ||| | || || || || Sbjct 3792 GATACAATCGACAACGTGAAGGCTAAGATTCAGGACAAGGAGGGTATCCCACCGGACCAG 3733 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | || || |||||||| || || ||||| || | ||||| | | ||||||||| Sbjct 3732 CAGAGGTTGATCTTTGCCGGAAAGCAGCTGGAGGATGGCCGCACACTCGCTGATTACAAC 3673 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 3672 ATCCAGAAGGAGTCCAC 3656 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||| || ||||| || || | ||||| || | || Sbjct 3624 ATGCAGATATTTGTGAAGACCCTCACCGGGAAAACCATAACCTTGGAAGTCGAAAGCTCG 3565 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | | || || || ||||| ||||| | ||||||||||| Sbjct 3564 GATACGATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCGCCAGATCAG 3505 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || || |||||||| || ||||| || | || || | | ||||||||| Sbjct 3504 CAGAGGCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACACTCGCTGATTACAAC 3445 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || || ||| ||| | || || || | ||| | || |||||| Sbjct 3444 ATCCAGAAGGAGAGCACTCTTCACTTGGTGCTGAGGCTTCGTGGAGGA 3397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337965587347472