Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq993 150 4e-31 seq4164 143 6e-29 seq560 113 1e-19 >seq993 Length=3989 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| |||||||| ||||| || || ||||| ||||| || | ||| || |||||| Sbjct 3185 AGCACAAGGTGAAGAGTGGACTCCTTCTGAATGTTATAATCTGCAAGAGTCCTTCCATCT 3244 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||||| || || || |||||||||||||| | | ||| |||||||| ||| Sbjct 3245 TCCAGCTGCTTCCCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGGATACCTTCCTTGTCT 3304 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 |||||||| ||||| | || | | | || || ||||| || || | || || || Sbjct 3305 TGAATTTTCGCCTTGACGTTGTCGATGGTATCGGAGCTCTCCACCTCCAACGTGATCGTC 3364 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || |||||||||||||||| ||||||| Sbjct 3365 TTCCCGGTCAGAGTCTTCACGAAGATCTGCATT 3397 Score = 132 bits (146), Expect = 1e-25 Identities = 163/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || ||||| ||||| || |||||||||||||| || | || | Sbjct 3634 GAGACGGAGGACTAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGCGAGTGTGCG 3693 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 ||||| || || ||||| ||||| ||||| | |||||||||||||| | ||| || Sbjct 3694 GCCATCCTCCAGCTGCTTT--CCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCC 3751 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || ||||| || || || | || | | ||||| ||||| || || || Sbjct 3752 TCCTTGTCCTGAATCTTAGCCTTCACGTTGTCGATTGTATCTGAGCTCTCGACCTCCAGG 3811 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || ||||| ||||| ||||| | |||||| Sbjct 3812 GTGATGGTTTTCCCTGTGAGCGTCTTGACGAAAATCTGCAT 3852 Score = 114 bits (126), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||| || |||||||||||||| || | || | ||||| || | Sbjct 3418 CAAG-TGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGCGAGTGTACGGCCATCCTCCA 3476 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||||||||| ||||||||||| || | || ||| |||||||| || || | Sbjct 3477 GCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCTGGCGGGATGCCTTCCTTGTCCTGGA 3536 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | | || || || || ||||| | || || ||||| | Sbjct 3537 TCTTAGCCTTGACGTTGTCGATCGTATCCGAGCTTTCGACTTCCAAGGTTATGGTTTTCC 3596 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| |||||||| || | |||||| Sbjct 3597 CGGTGAGGGTCTTCACAAATATCTGCAT 3624 >seq4164 Length=15189 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | ||| || || || || || ||||||||||| ||||| | || | Sbjct 219 GAGGCGGAGGACCAAATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCG 160 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || ||| |||||||||||||||||||| ||||| | | |||||||| Sbjct 159 GCCGTCCTCGAGCTGTTTTCCGGCGAAGATAAGCCTCTGTTGGTCTGGGGGTATTCCTTC 100 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || || || || || ||||| | || | |||| || || || || ||||| || Sbjct 99 TTTATCCTGGATCTTGGCCTTGACGTTATCGATTGTGTCGGAGCTTTCAACCTCAAGGGT 40 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| |||||||| |||||||||| |||||| Sbjct 39 GATAGTTTTGCCGGTGAGAGTTTTCACGAAGATCTGCAT 1 Score = 134 bits (148), Expect = 3e-26 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || || |||||||| || || || ||||| || ||||| || || | || || Sbjct 441 GAGGACCAGGTGGAGAGTAGATTCCTTCTGAATGTTATAGTCGGCCAAGGTCCGGCCGTC 382 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || ||| ||||||||||| |||||||| ||||||| || ||| |||||||| || Sbjct 381 CTCGAGCTGTTTTCCGGCGAAGATCAGCCTCTGTTGGTCCGGCGGGATACCTTCCTTGTC 322 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || || | || | | |||| || || || ||||| || || || || Sbjct 321 CTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCCACTTCTAGGGTGATCGT 262 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || ||||| || |||||||||| |||||| Sbjct 261 CTTTCCGGTGAGGGTTTTCACGAAGATTTGCATT 228 >seq560 Length=29322 Score = 113 bits (124), Expect = 1e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || |||||||| || || || ||||||||||| ||||| | || | Sbjct 29101 GAGGCGGAGGACGAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCGAGCGTCCG 29160 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || |||||||| || |||| |||||| |||| || |||||||| Sbjct 29161 GCCGTCCTCGAGTTGCTTACCGGCGAAAATGAGCCGCTGCTGATCCGGCGGAATTCCTTC 29220 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| || || || | || | |||| || || || || | || Sbjct 29221 CTTATCCTGAATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGGATTCAACCTCCAACGT 29280 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || ||||| || || |||||||||| |||||| || Sbjct 29281 GATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 29322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153662854912964