Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq993 161 2e-34 seq4164 154 3e-32 seq560 145 2e-29 >seq993 Length=3989 Score = 161 bits (178), Expect = 2e-34 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || || || || | ||| || || ||||||||||| ||||| Sbjct 3626 CCACCACGGAGACGGAGGACTAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGCG 3685 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || || || |||||||||||||| | || ||||| || Sbjct 3686 AGTGTGCGGCCATCCTCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGG 3745 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 |||||||||||||| || ||||| || || ||| | ||||| || || | |||| ||||| Sbjct 3746 ATACCCTCCTTGTCCTGAATCTTAGCCTTCACGTTGTCGATTGTATCTG-AGCTCTCGAC 3804 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| || || || || | ||||| ||||| |||||||| Sbjct 3805 CTCCAGGGTGATGGTTTTCCCTGTGAGCGTCTTGACGAAAATCTGCAT 3852 Score = 140 bits (154), Expect = 7e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || | || |||| || | ||||| || || ||||||||||| ||||| Sbjct 3398 CCTCCACGAAGCCTCAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGCG 3457 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||||||||| || || || ||||| ||||| | | || || || ||| Sbjct 3458 AGTGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCTGGCGGG 3517 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| |||||||| || || ||| | ||||| || ||||| ||||||| Sbjct 3518 ATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATCGTATCCGAGCTTTCGACT 3577 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | || || || || || || | ||||| || ||||||||||| Sbjct 3578 TCCAAGGTTATGGTTTTCCCGGTGAGGGTCTTCACAAATATCTGCAT 3624 Score = 131 bits (144), Expect = 4e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || ||||| || || || | ||| || || || ||||| || || ||| Sbjct 3170 CCTCCACGGAGACGAAGCACAAGGTGAAGAGTGGACTCCTTCTGAATGTTATAATCTGCA 3229 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | ||||| || || || ||||| ||||| |||| | || ||||| || Sbjct 3230 AGAGTCCTTCCATCTTCCAGCTGCTTCCCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGG 3289 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 ||||| ||||||||||| || || || || ||| | ||||| || | || |||| || || Sbjct 3290 ATACCTTCCTTGTCTTGAATTTTCGCCTTGACGTTGTCGATGGTAT-CGGAGCTCTCCAC 3348 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || | ||||||||||| || |||| |||||| ||||| ||||||||| Sbjct 3349 CTCCAACGTGATCGTCTTCCCGGTCAGAGTCTTCACGAAGATCTGCATT 3397 Score = 98.7 bits (108), Expect = 2e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || || ||||| | ||| || ||||||||||||||||||||| Sbjct 3854 CCACCACGAAGACGGAGGACTAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGCA 3913 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || || || || || ||||||| | || || || ||| Sbjct 3914 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCTGGGGGA 3973 Query 282993 ATACCCTCCTTGTC 283006 || || || ||||| Sbjct 3974 ATGCCTTCTTTGTC 3987 >seq4164 Length=15189 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 282871 AACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG 282930 |||| ||||| || || || ||||| || | || ||| || || ||||| ||||| | Sbjct 457 AACCTCCACGAAGACGGAGGACCAGGTGGAGAGTAGATTCCTTCTGAATGTTATAGTCGG 398 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 | | || ||||| ||||| || ||||| ||||| ||||||| | |||||||| || Sbjct 397 CCAAGGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATCAGCCTCTGTTGGTCCGGCG 338 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | ||||| |||||||| |||||||| || || ||| | ||||| ||||| || ||| | Sbjct 337 GGATACCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTCCA 278 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 |||| || ||||||||||| || || | || || ||||| || |||||| Sbjct 277 CTTCTAGGGTGATCGTCTTTCCGGTGAGGGTTTTCACGAAGATTTGCATT 228 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || ||||| || |||| ||| | || ||| || |||||||||||||| ||| Sbjct 227 CCGCCGCGGAGGCGGAGGACCAAATGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGCA 168 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| || ||||| ||||| ||||| | | |||||||| || Sbjct 167 AGGGTGCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATAAGCCTCTGTTGGTCTGGGGGT 108 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || || || || |||||||| || || ||| ||||||| ||||| || ||| || Sbjct 107 ATTCCTTCTTTATCCTGGATCTTGGCCTTGACGTTATCGATTGTGTCGGAGCTTTCAACC 48 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| || || || || | ||| || ||||| |||||||| Sbjct 47 TCAAGGGTGATAGTTTTGCCGGTGAGAGTTTTCACGAAGATCTGCAT 1 >seq560 Length=29322 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || ||||| || || || || | || ||| || |||||||||||||| || Sbjct 29093 CCGCCGCGGAGGCGGAGGACGAGGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCG 29152 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| ||||| ||||| ||||| || ||||| || || | || || || || |||| Sbjct 29153 AGCGTCCGGCCGTCCTCGAGTTGCTTACCGGCGAAAATGAGCCGCTGCTGATCCGGCGGA 29212 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||| || || ||||| || || ||| | ||||| ||||| || | ||| || Sbjct 29213 ATTCCTTCCTTATCCTGAATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGGATTCAACC 29272 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || | ||||||||||| ||||| | || || ||||| |||||||| || Sbjct 29273 TCCAACGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 29322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046595913179336