Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq4164 196 1e-44 seq993 174 4e-38 seq560 150 4e-31 seq1098 111 4e-19 >seq4164 Length=15189 Score = 196 bits (216), Expect = 1e-44 Identities = 164/201 (82%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||||||||| || ||||| |||||||| ||||| |||||||| ||| Sbjct 4 CAGATCTTCGTGAAAACTCTCACCGGCAAAACTATCACCCTTGAGGTTGAAAGCTCCGAC 63 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| ||||| ||||||||||| || || ||||| || Sbjct 64 ACAATCGATAACGTCAAGGCCAAGATCCAGGATAAAGAAGGAATACCCCCAGACCAACAG 123 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | |||||||||||||||||||||||||| || || | || |||||||| || ||| || Sbjct 124 AGGCTTATCTTCGCCGGAAAACAGCTCGAGGACGGCCGCACCCTTGCCGACTACAACATC 183 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || ||||| || || ||| Sbjct 184 CAGAAGGAATCGACCCTCCAT 204 Score = 196 bits (216), Expect = 1e-44 Identities = 167/206 (81%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||||||||| ||||| ||||| ||||||||||| || ||||||||||| ||| Sbjct 232 CAAATCTTCGTGAAAACCCTCACCGGAAAGACGATCACCCTAGAAGTGGAAAGCTCCGAC 291 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| |||||||| ||||| ||||| |||||||| || Sbjct 292 ACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGACCAACAG 351 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||||||||||||||||||||| || || |||| | ||||| |||||| | Sbjct 352 AGGCTGATCTTCGCCGGAAAACAGCTCGAGGACGGCCGGACCTTGGCCGACTATAACATT 411 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || || || || Sbjct 412 CAGAAGGAATCTACTCTCCACCTGGT 437 >seq993 Length=3989 Score = 174 bits (192), Expect = 4e-38 Identities = 162/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| ||||| || || || |||||||| | |||||||| ||||| || Sbjct 3393 CAGATCTTCGTGAAGACTCTGACCGGGAAGACGATCACGTTGGAGGTGGAGAGCTCCGAT 3334 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| || ||||| ||||| ||||| ||||| || |||||||| Sbjct 3333 ACCATCGACAACGTCAAGGCGAAAATTCAAGACAAGGAAGGTATCCCACCAGACCAGCAG 3274 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || || || || || || ||||| |||||||||||||||||||| ||||||||| | Sbjct 3273 AGGCTGATTTTTGCTGGGAAGCAGCTGGAAGATGGAAGGACTCTTGCAGATTATAACATT 3214 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 3213 CAGAAGGAGTCCACTCTTCACCTTGT 3188 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || |||||||| ||||| |||||||| ||||| || |||||||| Sbjct 3849 CAGATTTTCGTCAAGACGCTCACAGGGAAAACCATCACCCTGGAGGTCGAGAGCTCAGAT 3790 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || |||||||||||||| || || ||||| ||||||||||| Sbjct 3789 ACAATCGACAACGTGAAGGCTAAGATTCAGGACAAGGAGGGTATCCCACCGGACCAGCAG 3730 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| |||||||| ||||| || ||||| | || || || ||||| ||| || Sbjct 3729 AGGTTGATCTTTGCCGGAAAGCAGCTGGAGGATGGCCGCACACTCGCTGATTACAACATC 3670 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 3669 CAGAAGGAGTCCACTCTCCACCTAGT 3644 Score = 136 bits (150), Expect = 1e-26 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || ||||| || ||||| || ||| | || || |||||||| || Sbjct 3621 CAGATATTTGTGAAGACCCTCACCGGGAAAACCATAACCTTGGAAGTCGAAAGCTCGGAT 3562 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| |||||||| ||||| ||||| || || ||||| Sbjct 3561 ACGATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCGCCAGATCAGCAG 3502 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||||||||| || ||||| || ||||| | || || || ||||| ||| || Sbjct 3501 AGGCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACACTCGCTGATTACAACATC 3442 Query 178104 CAAAAAGA 178111 || || || Sbjct 3441 CAGAAGGA 3434 Score = 91.5 bits (100), Expect = 4e-13 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 178012 AGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCG 178071 ||||||||||||| || || || || ||||| | || |||||||| || || ||||||| Sbjct 3989 AGGACAAAGAAGGCATTCCCCCAGATCAGCAGAGGCTGATCTTCGCTGGCAAGCAGCTCG 3930 Query 178072 AAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 | ||||| | || ||||| || || ||| ||||||| || || || || ||||| || Sbjct 3929 AGGATGGCCGCACCCTTGCTGACTACAACATCCAAAAGGAGTCCACTCTCCATCTAGT 3872 >seq560 Length=29322 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| || || || || |||||||| | ||||| ||| ||| ||| Sbjct 29316 CAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACGTTGGAGGTTGAATCCTCCGAC 29257 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||||||||| || |||||||| || ||||| ||||| Sbjct 29256 ACGATCGACAACGTGAAGGCGAAGATTCAGGATAAGGAAGGAATTCCGCCGGATCAGCAG 29197 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || |||||||| || || ||||| || || |||| || ||||| || ||| || Sbjct 29196 CGGCTCATTTTCGCCGGTAAGCAACTCGAGGACGGCCGGACGCTCGCCGACTACAACATC 29137 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || || || || Sbjct 29136 CAGAAGGAATCGACTCTTCACCTCGT 29111 >seq1098 Length=28529 Score = 111 bits (122), Expect = 4e-19 Identities = 78/89 (88%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 |||||| |||||||| ||||| || | |||||||||||||| |||||||||||||| || Sbjct 19953 AGGAATTCCTCCGGATCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAAGATGGCAG 19894 Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAG 178110 || ||||||||||||||| ||||||||| Sbjct 19893 AACACTTGCCGATTATAACATCCAAAAAG 19865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203566422740696