Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Genlisea_20aurea_20[genbank_20GCA_5F000441915.1_202013-07-31] 10,684 sequences; 43,357,795 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq993 118 1e-21 seq4164 114 1e-20 seq2923 104 2e-17 >seq993 Length=3989 Score = 118 bits (130), Expect = 1e-21 Identities = 168/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || || || || ||| ||||||||| ||||| || || | Sbjct 3625 GCCACCACGGAGACGGAGGACTAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCAGC 3684 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| ||||| | || || |||||||| ||||| || |||| | ||| ||||||| || Sbjct 3685 GAGTGTGCGGCCATCCTCCAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGG 3744 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTC 41811 | | |||||||||| ||| | || || | ||| | | | ||| || || ||| Sbjct 3745 GATACCCTCCTTGTCC-TGAATCTTAGCCTTCACGTTGTCG-ATTGTATCT-GAGCTCTC 3801 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||| || || ||||| || || |||||||| ||||||||||||||| Sbjct 3802 GACCTCCAGGGTGATGGTTTTCCCTGTGAGCGTCTTGACGAAAATCTGCATG 3853 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| || || || ||| |||||||||||||||||| || | Sbjct 3170 CCTCCACGGAGACGAAGCACAAGGTGAAGAGTGGACTCCTTCTGAATGTTATAATCTGCA 3229 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | | || || |||||||| || || || ||||| | ||| ||||| | || Sbjct 3230 AGAGTCCTTCCATCTTCCAGCTGCTTCCCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGG 3289 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||| | ||| |||| || | ||| | | | || ||| |||||| Sbjct 3290 ATACCTTCCTTGT-CTTGAATTTTCGCCTTGACGTTGTCGATGGTATCGGAGCTCTCCAC 3348 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| ||| ||||| || || ||||| ||||| ||||| |||||||| Sbjct 3349 CTCCAACGTGATCGTCTTCCCGGTCAGAGTCTTCACGAAGATCTGCAT 3396 Score = 96.9 bits (106), Expect = 3e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || ||||| || ||| |||||| || ||||| ||||| | Sbjct 3853 GCCACCACGAAGACGGAGGACTAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGC 3912 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || |||||||||||||| ||||| ||||| | ||| || || | ||| Sbjct 3913 AAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCTGGGGG 3972 Query 41755 AACGCTCTCCTTGTCC 41770 || || || |||||| Sbjct 3973 AATGCCTTCTTTGTCC 3988 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/215 (71%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| || || |||||||||||||| ||||| || || | ||| || || | || || Sbjct 3415 CACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGCGAGTGTACGGCCATCCTC 3474 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||||||||||| || || | ||| || || | || | || ||||||||| | Sbjct 3475 CAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCTGGCGGGATGCCTTCCTTGTCC-T 3533 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCACCGTTATCG 41828 | | || || | ||| | | | || || ||| || || |||| ||||| | Sbjct 3534 GGATCTTAGCCTTGACGTTGTCGATCGTATCCGAGCT---TTCGACTTCCAAGGTTATGG 3590 Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| || || || ||||| || || ||||||||| Sbjct 3591 TTTTCCCGGTGAGGGTCTTCACAAATATCTGCATG 3625 >seq4164 Length=15189 Score = 114 bits (126), Expect = 1e-20 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || || |||||||||||||||||||||| Sbjct 455 CCTCCACGAAGACGGAGGACCAGGTGGAGAGTAGATTCCTTCTGAATGTTATAGTCGGCC 396 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGGG 41754 | ||| || |||| |||||||| || |||||||| ||||| | |||||||||| ||||| Sbjct 395 AAGGTCCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATCAGCCTCTGTTGGTCCGGCGGG 336 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || ||||||||| ||| || |||| ||| | | | |||||| |||| Sbjct 335 ATACCT-TCCTTGTCCTGGATCTTGGCCTTC-ACGTTGTCGATGGTGTCGGAGCTTTCCA 278 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || | || ||||| || || || || || || ||||| || ||||| Sbjct 277 CTTCTAGGGTGATCGTCTTTCCGGTGAGGGTTTTCACGAAGATTTGCAT 229 >seq2923 Length=6118 Score = 104 bits (114), Expect = 2e-17 Identities = 170/235 (72%), Gaps = 10/235 (4%) Strand=Plus/Minus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || |||||||| || || | || |||||||| || |||||||| | || |||||| Sbjct 4509 CCTCCGCCGCGCAGTCGAAGAACGAGATGCAGAGTCGATTCCTTCTGGACATTGTAGTCG 4450 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 | || | | |||| || ||||| ||||||||||| |||| |||||||| |||| Sbjct 4449 GCCAGAGATCTACCGTCCTCCAGCTGTTTGCCGGCGAAAATCAACCGCTGTTGATCCGGA 4390 Query 41753 GGAA-CGCTCTCCTTGTCCATGATTTTTTG-CTTCA-ACGA-CGACACAGT-GTCGCTCG 41807 |||| || | ||||||| | ||| | || | ||||| | || |||| | | | ||| Sbjct 4389 GGAATCGAT-TCCTTGTGC-TGAATCTTCGACTTCACATGATCGACGGAATCGGAGCT-- 4334 Query 41808 ACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| ||||||| ||| ||||||| |||||||| || || |||| || ||||| Sbjct 4333 -CTCTACCTCCAGCGTAATCGTTTCCCCCGTCAGGGTTTTCGCGAAGATTTGCAT 4280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462242259300800