Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq16 127 4e-24 seq19 120 6e-22 seq20 102 2e-16 seq10 102 2e-16 seq4 102 2e-16 seq17 100 6e-16 seq5 100 6e-16 seq1 100 6e-16 seq18 98.7 2e-15 seq14 98.7 2e-15 seq11 98.7 2e-15 seq9 98.7 2e-15 seq8 98.7 2e-15 seq7 98.7 2e-15 seq3 98.7 2e-15 seq2 98.7 2e-15 >seq16 Length=37887014 Score = 127 bits (140), Expect = 4e-24 Identities = 164/224 (73%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 230415 GGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGC-ATGAACGCTGAACTTATGG 230473 |||||| | || ||||| |||| || ||| || ||| ||||||| ||| | ||| Sbjct 5526408 GGAGTTTGTGTGCGACGCGCTTCCCTG-CGCGTTGGTGGGGATGAACGGTGATTTGATGA 5526350 Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533 | |||||||| ||||| || || || || | | | ||| || || | || ||| |||| Sbjct 5526349 GCCAGTACATTGAATTTGTTGCGGATCGGTTGCTGGGTGCGCTAGGGTGCGGGAAGGTGT 5526290 Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593 |||| | |||| || || | | |||||||||||||| || || ||||||||||||| Sbjct 5526289 ACAATGTTCAGAATCCGTTCGATTGGATGGAGCTCATTTCTCTGCAGGGGAAGACCAACT 5526230 Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||||| ||||| ||| | || ||||||| | || ||| ||| Sbjct 5526229 TCTTCGAGAAGCGCGTCGGGGAATATCAGAAGGCTTCTGTTATG 5526186 >seq19 Length=50746504 Score = 120 bits (132), Expect = 6e-22 Identities = 295/442 (67%), Gaps = 4/442 (1%) Strand=Plus/Plus Query 230200 TGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAA 230259 |||||| |||||||| | || || || || |||||||| ||||| ||||| || | Sbjct 32416500 TGTGTTAAAGGTATTTTCTTCTCTGGAAGCTTCTGCGCTATCTTCTGGCTCAAAAAACGA 32416559 Query 230260 GGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCAT 230319 || | ||||| || ||| | | || ||||| |||| ||||||||| || || || Sbjct 32416560 GGACTCATGCCGGGGCTCACTTTCTCAAACGAACTCATTTCTCGCGACGAAGGGCTACAC 32416619 Query 230320 CAACAGTTCGGCGAG-CTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAGACGGT 230378 | |||| || | || | || || ||| | | ||||| | ||| || Sbjct 32416620 TGCGATTTCG-CGTGTCTGCTCTACTCTCTGCTGAGGCAGAAGCTCACCGAGGAGCGCGT 32416678 Query 230379 CAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCC 230438 | | || | | || || || || | || |||||| | || ||||| | || Sbjct 32416679 GAGGGAGATTGTGAGGGACGCCGTGGATATTGAGCGGGAGTTTGTGTGCGACGCGCTGCC 32416738 Query 230439 ATGTCGCCTTATTGGC-ATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCG 230497 || ||| || ||| ||||||| ||| | ||| | || ||||| || || || || | Sbjct 32416739 CTG-CGCGTTGGTGGGGATGAACGGTGATTTGATGAGTCAATACATTGAGTTTGTGGCAG 32416797 Query 230498 ACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCAT 230557 | || | | | || ||||| | || ||| |||||||| | ||||||| || | | Sbjct 32416798 ATCGGTTGCTGGGGGCGCTTGGGTGCGGGAAGGTGTACAATGTTCAGAACCCGTTCGATT 32416857 Query 230558 TTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACT 230617 |||||||| |||||||| || || ||||||||||||||||| ||||| ||| | || | Sbjct 32416858 GGATGGAGCTGATTTCGCTGCAGGGAAAGACCAACTTCTTCGAGAAGCGCGTCGGGGAGT 32416917 Query 230618 ATCAGAGGCCTGGTGTGATGAA 230639 |||| | | || ||| ||||| Sbjct 32416918 ATCAAAAGGCTTCTGTTATGAA 32416939 >seq20 Length=47900577 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 |||||||||||||||||| |||||||||| || || |||| || |||||||||||||||| Sbjct 34208884 TTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 34208943 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 34208944 GCCCCACGGTGGGC 34208957 >seq10 Length=51566898 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 |||||||||||||||||| |||||||||| || || |||| || |||||||||||||||| Sbjct 50855245 TTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 50855186 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 50855185 GCCCCACGGTGGGC 50855172 >seq4 Length=52388848 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 |||||||||||||||||| |||||||||| || || |||| || |||||||||||||||| Sbjct 9545294 TTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 9545235 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 9545234 GCCCCACGGTGGGC 9545221 >seq17 Length=41641078 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 5718972 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 5719031 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 5719032 CCCCACGGTGGGC 5719044 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 12745363 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 12745422 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 12745423 CCCACGGTGGGC 12745434 >seq5 Length=42234498 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 4809249 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 4809190 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 4809189 CCCCACGGTGGGC 4809177 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 7319700 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 7319759 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 7319760 CCCACGGTGGGC 7319771 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 31894897 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 31894956 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 31894957 CCCACGGTGGGC 31894968 >seq1 Length=56831395 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 ||||||||||||||||| |||||||||| || || |||| || ||||||||||||||||| Sbjct 53455185 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 53455126 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 53455125 CCCCACGGTGGGC 53455113 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 47617289 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 47617230 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 47617229 CCCACGGTGGGC 47617218 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 54394637 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 54394578 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 54394577 CCCACGGTGGGC 54394566 >seq18 Length=58018742 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 50760183 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 50760124 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 50760123 CCCACGGTGGGC 50760112 >seq14 Length=49042192 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 4557006 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 4557065 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 4557066 CCCACGGTGGGC 4557077 >seq11 Length=34766867 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 2122312 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 2122371 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2122372 CCCACGGTGGGC 2122383 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 3006523 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 3006582 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 3006583 CCCACGGTGGGC 3006594 >seq9 Length=50189283 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 40302166 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 40302225 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 40302226 CCCACGGTGGGC 40302237 >seq8 Length=47837022 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 16345974 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 16346033 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 16346034 CCCACGGTGGGC 16346045 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 39581659 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 39581600 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 39581599 CCCACGGTGGGC 39581588 >seq7 Length=44630203 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 1304509 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1304568 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1304569 CCCACGGTGGGC 1304580 >seq3 Length=45779434 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 2544119 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 2544178 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2544179 CCCACGGTGGGC 2544190 Score = 95.1 bits (104), Expect = 3e-14 Identities = 157/224 (70%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 230415 GGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGC-ATGAACGCTGAACTTATGG 230473 |||||| | || ||||| |||| ||| || || ||| ||||||| || | ||| Sbjct 40573333 GGAGTTTGTGTGCGACGCGCTTCCGTGT-GCGTTGGTGGGGATGAACGGGGAGTTGATGA 40573391 Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533 | | ||| || || || || || || || | | | ||| ||||| | | ||| |||| Sbjct 40573392 GTCGGTATATTGAGTTTGTTGCGGATCGGTTGCTGGATGCGCTTGGGTGTGGGAAGGTGT 40573451 Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593 || || |||| ||||||| | |||||||| ||||||||||| ||||| || |||| Sbjct 40573452 ACGGTGCTCAGAATCCCTTTGATTGGATGGAGCTTATTTCGCTTCAGGGGAAAACTAACT 40573511 Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 |||| || ||||| || | || || |||| | || ||| ||| Sbjct 40573512 TCTTTGAGAAGCGCGTTGGGGAGTACCAGAAGGCTTCTGTTATG 40573555 Score = 86.0 bits (94), Expect = 1e-11 Identities = 143/202 (71%), Gaps = 11/202 (5%) Strand=Plus/Plus Query 229753 TCTGC--GTTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCAA 229810 ||||| ||||||||||||||| || | || ||||| ||||| ||||| || | ||| Sbjct 40572672 TCTGCATGTTCCCAATCCAATACCCTCAAATCTGGGAAATGTATAAGAAAGCCGAGGCCT 40572731 Query 229811 CTTTCTGGACCACTGAGGAAGT--TCCTCTGAACGCA-GACGTCGTCGACTGGCGTGAGA 229867 | |||||||| | ||||| || ||||| |||| ||| || | ||||| | | Sbjct 40572732 CCTTCTGGACGGCGGAGGAGGTGGACCTCT---CGCAGGACCTCCGCCACTGG---GCCA 40572785 Query 229868 AACTCAATGACGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTCCG 229927 |||| |||| ||| || || ||||||| ||| |||| | || ||||| | ||||| Sbjct 40572786 CCCTCAGCGACGGCGAGCGCCACTTCATCACCCACGTCCTCGCCTTCTTCGCCGCCTCCG 40572845 Query 229928 ATGGTATTGTGATGGAAAATCT 229949 | || || || | ||||| || Sbjct 40572846 ACGGCATCGTCCTAGAAAACCT 40572867 >seq2 Length=48577505 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||| |||||||||| || || |||| || |||||||||||||||||| Sbjct 44900402 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 44900461 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 44900462 CCCACGGTGGGC 44900473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057807857936330