Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq3 93.3 4e-14 seq19 86.0 6e-12 >seq3 Length=45779434 Score = 93.3 bits (102), Expect = 4e-14 Identities = 120/163 (74%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 ||||||||||||||||| || || || || |||| ||| ||||||||||| || || Sbjct 40573254 AGACACGCGAAGTCGCAGTGAAGCCCCTCATCTCGCGAGATGAGTTCGTTGGAGAAGGTG 40573195 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATG-ACCCCGAAAA 16317 | ||| |||||| || || ||||| | ||| |||||||| ||||| | || || || Sbjct 40573194 AGCCCCGGCATTAACCCACGCTTCTTGAGCCAAAATATCGC-GCAAAAGCTTCCGGAGAA 40573136 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCG 16360 |||||| ||||| || | || || || | | || |||||| Sbjct 40573135 GAATATTCCCTCGACGCAAGCGAATGCCACGAGGCGCTCCGCG 40573093 >seq19 Length=50746504 Score = 86.0 bits (94), Expect = 6e-12 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 ||||||||||| ||||| ||||| |||||||| | || |||||||| || ||||| Sbjct 32416636 AGACACGCGAAATCGCAGTGTAGCCCTTCGTCGCGAGAAATGAGTTCGTTTGAGAAAGTG 32416577 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA-AATGACCCCGAAAA 16317 | ||| ||||| ||||||||| || | |||||| || || ||| || || || || Sbjct 32416576 AGCCCCGGCATGAGTCCTCGTTTTTTGAGCCAGAAGATAGC-GCAGAAGCTTCCAGAGAA 32416518 Query 16318 GAATATACCCTCAACA 16333 ||| ||||| | |||| Sbjct 32416517 GAAAATACCTTTAACA 32416502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511406786318120