Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq11 96.9 3e-15 seq6 95.1 1e-14 seq4 95.1 1e-14 seq12 91.5 1e-13 >seq11 Length=34766867 Score = 96.9 bits (106), Expect = 3e-15 Identities = 79/96 (82%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 20458 TCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCA 20517 || |||||||||||||| ||||| || || ||||| |||||||| || || ||||||||| Sbjct 8814285 TCATGTCAAATGTATCAGCGATCTGCCGACATGGGCCTGGGTGTCCCATTTAATATTGCA 8814344 Query 20518 AGTTATGCGCTGCTTACGTATATGATTGCACATGTT 20553 ||||||||| || || | |||||||| |||||| Sbjct 8814345 TCTTATGCGCTCCTGACATGCATGATTGCTCATGTT 8814380 >seq6 Length=51416163 Score = 95.1 bits (104), Expect = 1e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 20452 GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAAT 20511 || || || |||||||||||||| ||||| ||||||||||| ||||| |||| || ||| Sbjct 831199 GAGTTATCATGTCAAATGTATCAGCGATCTGCTGATATGGGCCTGGGCATTCCATTTAAT 831258 Query 20512 ATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTT 20553 |||||| |||||| || | || | |||||||| |||||| Sbjct 831259 ATTGCATCTTATGCCCTTTTGACATGCATGATTGCTCATGTT 831300 >seq4 Length=52388848 Score = 95.1 bits (104), Expect = 1e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 20452 GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAAT 20511 || || || |||||||||||||| ||||| ||||| ||||| ||||| ||||| || ||| Sbjct 847644 GAGTTATCATGTCAAATGTATCAGCGATCTGCTGACATGGGCCTGGGCGTTCCATTTAAT 847703 Query 20512 ATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTT 20553 |||||| |||||| || | || | |||||||| |||||| Sbjct 847704 ATTGCATCTTATGCCCTTTTGACATGCATGATTGCTCATGTT 847745 >seq12 Length=40091314 Score = 91.5 bits (100), Expect = 1e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 20434 TTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGA 20493 || || || |||||| || | || |||||||||||||| ||||| || || ||||| Sbjct 2991607 TTCTATGTAGCTAATGGGGAGCTATCATGTCAAATGTATCAGCGATCTGCCGACATGGGC 2991666 Query 20494 CTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTT 20553 |||||||| || || ||||||||| |||||| || || || | ||||| || |||||| Sbjct 2991667 CTGGGTGTCCCATTTAATATTGCATCTTATGCACTCCTGACATGCATGATCGCTCATGTT 2991726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399178205719495