Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 136 6e-27 >seq3 Length=45779434 Score = 136 bits (150), Expect = 6e-27 Identities = 392/586 (67%), Gaps = 24/586 (4%) Strand=Plus/Plus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 |||| || ||| || | | | || ||||||||||| || || || |||||||||| | Sbjct 40572678 TGTTCCCAATCCAATACCCTCAAATCTGGGAAATGTATAAGAAAGCCGAGGCCTCCTTCT 40572737 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115 |||||| || ||||| || || || ||||||| | | |||| || | | | | Sbjct 40572738 GGACGGCGGAGGAGGTGGACCTCTCGCAGGACCTCCGCCACTGGGCCACCC---TCAGCG 40572794 Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175 | ||||| | || || | ||| | | |||||||| |||| |||||| || |||| Sbjct 40572795 ACGGCGAGCGCCACTTCATCACCCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCG 40572854 Query 125176 TCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCA--TTCCAGAGGTGTCGT 125232 || || || || | | | || ||| | |||| | ||| | || |||| || Sbjct 40572855 TCCTAGAAAACCTCGCCGGC-CGCTTCACCAAAGAAAT--CCAACTCCCGGAGGCC-CGC 40572910 Query 125233 GCTTT-TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACT--CTACAC 125289 ||||| ||||| ||||||||| || || || | ||||| ||||||||| || | | Sbjct 40572911 GCTTTCTACGGCTTCCAAATCGCCATCGAAAATATCCACTCCGAAATGTACAGCCTCCTC 40572970 Query 125290 TGATTGACATGTACATTCGCGA-TCCGCAACGTAAACACATGCTCTTTAACGCAATCGAC 125348 | | || | ||||| || ||| || ||| | | || ||| ||| || || Sbjct 40572971 TTA--GAAACCTACATCAAAGACTCCACAGAAAAAAATCGT-CTGTTTCGCGCCATAAAC 40573027 Query 125349 ACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACG-ACAA 125407 || | || | || ||||| || || |||| | || |||||||||| | | || Sbjct 40573028 ACCATCCCATGCATCACCAAAAAAGCCCAGTGGGCCCTCCGCTGGATCGATGCCTCAGAA 40573087 Query 125408 GTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG 125467 ||||| | || | || ||||||||||| ||| ||||| || ||||| || || Sbjct 40573088 TCCTTCG----CGGAGCGCCTCGTGGCATTCGCTTGCGTCGAGGGAATATTCTTCTCCGG 40573143 Query 125468 TAG-TTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACA 125526 || |||||| || || ||||||||||||||||| || | ||||| || || || | Sbjct 40573144 AAGCTTTTGC-GCGATATTTTGGCTCAAGAAGCGTGGGTTAATGCCGGGGCTCACCTTCT 40573202 Query 125527 GTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572 ||||| | || || ||||| ||||| || ||||| ||||| || Sbjct 40573203 CCAACGAACTCATCTCGCGAGATGAGGGGCTTCACTGCGACTTCGC 40573248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741048167481160