Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq10 107 2e-18 seq17 98.7 1e-15 seq7 98.7 1e-15 seq13 95.1 1e-14 >seq10 Length=51566898 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| | ||||| ||| | ||||| | || | || || | Sbjct 4577244 ATGCAAATCTTCGTCAAAACCCTTACTGGCAAAACAATCACGCTAGAGGTGGAGTCCTCC 4577185 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || ||| |||||| || || |||||||| ||||| ||||| Sbjct 4577184 GACACAATCGATAACGTGAAAGCCAAGATTCAAGATAAGGAAGGGATTCCTCCGGATCAG 4577125 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | || | || ||| |||||||||||||| | |||| | || ||| || || Sbjct 4577124 CAACGTTTGATCTTCGCCGGAAAACAACTCGAAGACGGCAGAACCCTCGCCGATTACAAT 4577065 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || |||||||| ||| | ||| |||| || Sbjct 4577064 ATCCAGAAAGAATCGACTCTGCATTTGGTGCT 4577033 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| ||||||| || |||||||| | || | || || Sbjct 4577472 ATGCAGATCTTCGTGAAAACCCTAACTGGCAAGACGATCACCTTGGAGGTGGAGTCCTCT 4577413 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || || || || ||||| || || || ||||| |||||| Sbjct 4577412 GACACCATCGACAACGTGAAGGCCAAAATCCAAGACAAGGAGGGCATTCCTCCGGATCAA 4577353 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | | || | || ||| ||||| |||||||| | |||| | || |||||| ||| Sbjct 4577352 CAGCGTTTAATCTTCGCCGGAAAACAGCTCGAAGACGGCAGAACCCTCGCCGACTACAAC 4577293 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| || || || |||| || ||||| Sbjct 4577292 ATCCAAAAGGAGTCCACGCTCCACCTCGTCCT 4577261 >seq17 Length=41641078 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| || || || || | |||||| | || | || || | Sbjct 3124244 ATGCAGATCTTCGTGAAAACTTTGACCGGTAAGACCATCACCCTTGAGGTGGAGTCCTCC 3124303 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || ||| |||||| ||||| |||||||| || || || || Sbjct 3124304 GACACCATCGATAACGTGAAAGCTAAGATTCAAGACAAGGAAGGGATCCCACCTGACCAG 3124363 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||||| || | | || ||||| || || |||| | ||| | | |||||| ||| Sbjct 3124364 CAGAGACTTATCTTTGCGGGTAAACAGCTTGAGGATGGTCGAACCCTTGCCGACTACAAC 3124423 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| ||||| ||| |||| || || || Sbjct 3124424 ATCCAAAAGGAATCCACTCTCCACCTCGTGCT 3124455 >seq7 Length=44630203 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | |||||||| | |||||| | || | || Sbjct 36855588 ATGCAAATCTTTGTCAAGACTCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 36855647 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | |||||| |||||| ||||||||||| || || || || ||| Sbjct 36855648 GACACTATTGACAATGTCAAAGCCAAGATTCAGGACAAAGAAGGTATCCCACCAGACCAA 36855707 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || ||||||| | |||||||| || ||||||| ||| | | || || ||| Sbjct 36855708 CAGAGGCTCATTTTTGCTGGCAAACAGCTTGAAGATGGCCGAACCTTGGCTGATTACAAC 36855767 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || |||||||||||||| |||| |||| || Sbjct 36855768 ATCCAAAAAGAATCTACCCTCCACTTGGTGCT 36855799 >seq13 Length=45874162 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| |||| || ||| |||| || | || | || || Sbjct 25114912 ATGCAAATCTTCGTCAAAACCCTAACCGGTAAAACGATTACGCTAGAGGTCGAGTCCTCT 25114853 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || ||| ||||| ||||| ||||| || || || || || Sbjct 25114852 GACACCATCGATAACGTGAAAGCTAAGATCCAGGACAAGGAAGGCATTCCACCAGACCAG 25114793 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | | || | || ||| ||||| |||||||| | |||| | || ||| || || Sbjct 25114792 CAGCGCTTGATCTTCGCCGGAAAACAGCTCGAAGACGGCAGAACCCTCGCCGATTACAAT 25114733 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| |||||||| || | |||||||| || |||| | ||||| Sbjct 25114732 ATTCAGAAAGAATCGACGCTTCATCTGGTGCTTCGACTCCGCGGAGG 25114686 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | |||||||| | |||||| | || | || Sbjct 29045551 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 29045492 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | |||||| |||||| ||||||||||| || || || || ||| Sbjct 29045491 GACACTATTGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATCCCACCAGACCAA 29045432 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || ||||||| | || ||||| || ||||||| ||| | | || || ||| Sbjct 29045431 CAGAGGCTCATTTTTGCTGGAAAACAGCTTGAAGATGGCCGAACCTTGGCAGATTACAAC 29045372 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || ||||||||||| |||| |||| || Sbjct 29045371 ATCCAGAAAGAATCTACCCTCCACTTGGTGCT 29045340 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | |||||||| | |||||| | || | || Sbjct 29059485 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 29059426 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | |||||| |||||| ||||||||||| || || || || ||| Sbjct 29059425 GACACTATTGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATCCCACCAGACCAA 29059366 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || ||||||| | || ||||| || ||||||| ||| | | || || ||| Sbjct 29059365 CAGAGGCTCATTTTTGCTGGAAAACAGCTTGAAGATGGCCGAACCTTGGCAGATTACAAC 29059306 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || ||||||||||| |||| |||| || Sbjct 29059305 ATCCAGAAAGAATCTACCCTCCACTTGGTGCT 29059274 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | |||||||| | |||||| | || | || Sbjct 29045779 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 29045720 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | |||||| |||||| ||||||||||| || || || || ||| Sbjct 29045719 GACACTATTGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATCCCACCAGACCAA 29045660 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || ||||||| | || ||||| || || |||| | | | | ||| || ||| Sbjct 29045659 CAGAGGCTCATTTTTGCTGGAAAACAGCTTGAGGATGGCCGTACCCTTGCCGATTACAAC 29045600 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| ||||| || || |||| ||||| || Sbjct 29045599 ATTCAGAAAGAGTCCACCCTCCACCTGGTGCT 29045568 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | || || ||||| |||| || ||| |||| || | || | || || Sbjct 25115144 CAATATGCAGATCTTCGTCAAAACCCTAACCGGTAAAACGATTACGCTAGAGGTCGAGTC 25115085 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 |||||| ||||| | || ||| || || ||||| ||||| || || || || Sbjct 25115084 CTCCGACACAATCGATAACGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCACCGGA 25115025 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 ||| || | | || | || ||| |||||||||||||| | |||| || ||| || Sbjct 25115024 TCAGCAGCGTTTGATCTTCGCCGGTAAACAACTCGAAGACGGCAGAACTCTCGCCGATTA 25114965 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || || |||||||| || |||| || ||||| Sbjct 25114964 CAATATCCAGAAAGAATCGACGCTCCACCTCGTCCT 25114929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478655273913520