Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq13 122 7e-23 seq10 109 5e-19 seq7 109 5e-19 >seq13 Length=45874162 Score = 122 bits (134), Expect = 7e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| |||| || ||| ||||||| | || |||||| || Sbjct 25114912 ATGCAAATCTTCGTCAAAACCCTAACCGGTAAAACGATTACGCTAGAGGTCGAGTCCTCT 25114853 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || ||| ||||| ||||| |||||||| || || || || Sbjct 25114852 GACACCATCGATAACGTGAAAGCTAAGATCCAGGACAAGGAAGGCATTCCACCAGACCAG 25114793 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | || ||| || || |||||||| | ||||| | || |||||| || Sbjct 25114792 CAGCGCTTGATCTTCGCCGGAAAACAGCTCGAAGACGGCAGAACCCTCGCCGATTACAAT 25114733 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||||| |||||||| || ||||| | ||| Sbjct 25114732 ATTCAGAAAGAATCGACGCTTCATCTGGTG 25114703 Score = 111 bits (122), Expect = 1e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| ||||| | || || ||||| |||| || ||| ||||||| | || |||||| | Sbjct 25115144 CAATATGCAGATCTTCGTCAAAACCCTAACCGGTAAAACGATTACGCTAGAGGTCGAGTC 25115085 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | |||||| ||||| | || ||| || || ||||| |||||||| || || || Sbjct 25115084 CTCCGACACAATCGATAACGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCACCGGA 25115025 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||| ||| | |||| | || ||| || ||||||||||| | ||||| || |||||| Sbjct 25115024 TCAGCAGCGTTTGATCTTCGCCGGTAAACAACTCGAAGACGGCAGAACTCTCGCCGATTA 25114965 Query 24167 TAACATTCAAAAAGAATCTAC 24187 || || || |||||||| || Sbjct 25114964 CAATATCCAGAAAGAATCGAC 25114944 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || || |||||||| | |||||| | || || ||| Sbjct 29046007 ATGCAAATCTTTGTCAAGACCTTGACTGGAAAGACAATTACCCTTGAGGTGGAGAGTTCT 29045948 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| |||||| |||||||| || || || ||||| ||| Sbjct 29045947 GACACCATTGACAATGTCAAGGCTAAGATTCAAGACAAAGAGGGTATCCCACCCGACCAA 29045888 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||||||||| | | || ||||| || || |||| | | | | | |||||| ||| Sbjct 29045887 CAGAGACTGATCTTTGCTGGAAAGCAGCTTGAGGATGGCCGTACCCTTGCCGATTACAAC 29045828 Query 24171 ATTCAAAAAGAATCTAC 24187 ||||| ||||| || || Sbjct 29045827 ATTCAGAAAGAGTCCAC 29045811 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || | |||||||| | || ||| | || || ||| | Sbjct 29045551 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 29045492 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | |||||| |||||| ||||||||||| || || || || ||| Sbjct 29045491 GACACTATTGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATCCCACCAGACCAA 29045432 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || |||| | || || || || ||||||| | ||| | | ||||| ||| Sbjct 29045431 CAGAGGCTCATTTTTGCTGGAAAACAGCTTGAAGATGGCCGAACCTTGGCAGATTACAAC 29045372 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || || ||||||||||| | || || ||| Sbjct 29045371 ATCCAGAAAGAATCTACCCTCCACTTGGTG 29045342 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || | |||||||| | || ||| | || || ||| | Sbjct 29059485 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 29059426 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | |||||| |||||| ||||||||||| || || || || ||| Sbjct 29059425 GACACTATTGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATCCCACCAGACCAA 29059366 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || |||| | || || || || ||||||| | ||| | | ||||| ||| Sbjct 29059365 CAGAGGCTCATTTTTGCTGGAAAACAGCTTGAAGATGGCCGAACCTTGGCAGATTACAAC 29059306 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || || ||||||||||| | || || ||| Sbjct 29059305 ATCCAGAAAGAATCTACCCTCCACTTGGTG 29059276 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || | |||||||| | || ||| | || || ||| | Sbjct 29045779 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 29045720 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | |||||| |||||| ||||||||||| || || || || ||| Sbjct 29045719 GACACTATTGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATCCCACCAGACCAA 29045660 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || |||| | || || || || || |||| | | | | | |||||| ||| Sbjct 29045659 CAGAGGCTCATTTTTGCTGGAAAACAGCTTGAGGATGGCCGTACCCTTGCCGATTACAAC 29045600 Query 24171 ATTCAAAAAGAATCTAC 24187 ||||| ||||| || || Sbjct 29045599 ATTCAGAAAGAGTCCAC 29045583 >seq10 Length=51566898 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| | ||||| ||| | || || | || || ||| || | Sbjct 4577244 ATGCAAATCTTCGTCAAAACCCTTACTGGCAAAACAATCACGCTAGAGGTGGAGTCCTCC 4577185 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || ||| |||||| || || ||||| || ||||| ||||| Sbjct 4577184 GACACAATCGATAACGTGAAAGCCAAGATTCAAGATAAGGAAGGGATTCCTCCGGATCAG 4577125 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | |||| | || ||| || ||||||||||| | ||||| | || |||||| || Sbjct 4577124 CAACGTTTGATCTTCGCCGGAAAACAACTCGAAGACGGCAGAACCCTCGCCGATTACAAT 4577065 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || || |||||||| || | ||||| ||| Sbjct 4577064 ATCCAGAAAGAATCGACTCTGCATTTGGTG 4577035 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| ||||||| || |||| ||| | || || ||| || Sbjct 4577472 ATGCAGATCTTCGTGAAAACCCTAACTGGCAAGACGATCACCTTGGAGGTGGAGTCCTCT 4577413 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || || || ||||| || ||||| ||||| |||||| Sbjct 4577412 GACACCATCGACAACGTGAAGGCCAAAATCCAAGACAAGGAGGGCATTCCTCCGGATCAA 4577353 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | | || | || ||| || || |||||||| | ||||| | || ||| || ||| Sbjct 4577352 CAGCGTTTAATCTTCGCCGGAAAACAGCTCGAAGACGGCAGAACCCTCGCCGACTACAAC 4577293 Query 24171 ATTCAAAAAGAATCTAC 24187 || ||||| || || || Sbjct 4577292 ATCCAAAAGGAGTCCAC 4577276 >seq7 Length=44630203 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || | |||||||| | || ||| | || || ||| | Sbjct 36855588 ATGCAAATCTTTGTCAAGACTCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 36855647 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | |||||| |||||| ||||||||||| || || || || ||| Sbjct 36855648 GACACTATTGACAATGTCAAAGCCAAGATTCAGGACAAAGAAGGTATCCCACCAGACCAA 36855707 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || |||| | ||||| || || ||||||| | ||| | | ||||| ||| Sbjct 36855708 CAGAGGCTCATTTTTGCTGGCAAACAGCTTGAAGATGGCCGAACCTTGGCTGATTACAAC 36855767 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || |||||||||||||| | || || ||| Sbjct 36855768 ATCCAAAAAGAATCTACCCTCCACTTGGTG 36855797 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || || || ||||| | || ||| | || |||||| | | Sbjct 36855132 ATGCAAATCTTTGTTAAGACCTTGACGGGAAAGACAATCACCCTTGAGGTCGAGAGCTCC 36855191 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || || |||||| |||||||| || || ||||| |||||| Sbjct 36855192 GACACCATTGACAACGTTAAGGCTAAGATTCAGGACAAAGAGGGTATCCCTCCAGATCAA 36855251 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | || ||||| || || |||| | | | | | ||||| ||| Sbjct 36855252 CAGAGGCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGCCGTACCCTTGCTGATTACAAC 36855311 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || || || || || || |||| || || Sbjct 36855312 ATCCAGAAGGAGTCCACTCTTCACTTGGT 36855340 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || | ||||| || | ||||| | || || ||| | Sbjct 36855816 ATGCAAATCTTTGTGAAGACCCTTACTGGGAAGACCATTACTTTGGAGGTAGAGAGCTCA 36855875 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | || || |||||| ||||| || || || || || || ||| Sbjct 36855876 GACACAATTGACAATGTGAAGGCAAAGATCCAAGACAAGGAGGGTATCCCACCAGACCAA 36855935 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || |||| | ||||| || || ||||||| | ||| | | ||||| ||| Sbjct 36855936 CAGAGGCTCATTTTTGCTGGCAAACAGCTTGAAGATGGCCGAACCTTGGCTGATTACAAC 36855995 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || |||||||||||||| | || || ||| Sbjct 36855996 ATCCAAAAAGAATCTACCCTCCACTTGGTG 36856025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429929759344605