Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq19 84.2 2e-11 seq17 84.2 2e-11 seq7 84.2 2e-11 >seq19 Length=50746504 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||| || || || || || || ||||||||| | || ||| | Sbjct 29366816 ATGCAAATATTTGTGAAGACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCT 29366757 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || ||| ||| |||| || ||| || ||| || || || || |||| ||||| Sbjct 29366756 GATACTATTG-ACAATGTGAAAGCTAAGATTCAGGACAAGGAGGGTATCCCTCCAGATCA 29366698 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| || |||| ||| || | ||||||||||||| ||| |||| ||||| || Sbjct 29366697 GCAAAGGCTCATTTTTGCTGGGAGGCAATTAGAAGATGGTCGTACCTTGGCAGATTACAA 29366638 Query 115465 CATTCAAAAAGAGTCTACTATACAT 115489 ||||| || || || || || ||| Sbjct 29366637 TATTCAGAAGGAATCCACCATGCAT 29366613 >seq17 Length=41641078 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG--TCCA 115343 ||||| ||||| ||||| || | |||||||| ||||| ||| | || |||| | || Sbjct 3124700 ATGCAGATTTTCGTCAAGACTTTGACGGGAAAGACCATCACCTTGGAGGTGGAGAGTTCA 3124759 Query 115344 GCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 | || | ||||| || ||| || ||| ||||| || || ||||| || Sbjct 3124760 GATACCATA---GACAATGTGAAAGCCAAGATTCAAGATAAGGAGGGTATCCCCCCAGAC 3124816 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||| || ||||| | ||| || ||||| | ||||||| |||| | || |||||| Sbjct 3124817 CAGCAGAGGCTTATCTTTGCTGGTAAACAGCTTGAAGATGGACGAACCCTTGCAGATTAT 3124876 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAG 115500 ||||| || || || ||||| | || |||| ||||| Sbjct 3124877 AACATCCAGAAGGAATCTACCCTGCACTTGGTTTTGAG 3124914 >seq7 Length=44630203 Score = 84.2 bits (92), Expect = 2e-11 Identities = 152/218 (70%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 115280 TTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAA-CG-G 115337 ||| | |||||||| || || || || ||||| || || ||||| || ||||| || | Sbjct 36854898 TTATAGATGCAAATCTTCGTTAAGACCCTCACTGGTAAGACCATCACTCTCGAAGTCGAG 36854957 Query 115338 AGTCCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCC 115396 ||| ||| || | ||||| ||||| |||||| || || ||||| |||| Sbjct 36854958 AGTTCAGATACCATA---GACAATGTAAAGGCCAAAATTCAAGACAAGGAAGGGATCCCA 36855014 Query 115397 GTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCC 115456 ||||||||| | || |||| ||| ||||| || | || |||| ||| | || Sbjct 36855015 CCAGATCAGCAACGGCTCATTTTTGCTGGCAAGCAGCTTGAGGATGGACGTACCCTTGCT 36855074 Query 115457 GATTATAACATTCAAAAAGAGTCTACTATACATATGGT 115494 ||||||||||| ||||| ||||| ||| | || |||| Sbjct 36855075 GATTATAACATCCAAAAGGAGTCCACTCTCCACTTGGT 36855112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425337825998920