Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq13 109 4e-19 seq7 93.3 3e-14 seq17 86.0 4e-12 >seq13 Length=45874162 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 39511 ACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCC 39570 |||||||||| |||| ||| || || ||||||||||| |||| || |||| ||| Sbjct 23083041 ACCAAATGCAGAGTGGATTCCTTCTGGATATTATAATCAGCCAGGGTACGCCCATCTTCC 23083100 Query 39571 AATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCAT 39630 | || ||||| ||||||| | | |||||| || | || | ||||| ||||| | Sbjct 23083101 AGCTGCTTCCCTGCAAAAATAAGCCTCTGCTGGTCTGGTGGAATACCTTCCTTGTCCTGT 23083160 Query 39631 ATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTA 39690 || ||| || | | | | ||||| | |||||| || |||||||| || || || Sbjct 23083161 ATCTTTGCCTTCACATTATCAATGGTGTCAGAGCTTTCAACCTCCAAAGTTATGGTCTTT 23083220 Query 39691 CCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 ||||| ||||| || |||||||| |||||| Sbjct 23083221 CCCGTCAAAGTCTTCACGAAGATTTGCATG 23083250 Score = 98.7 bits (108), Expect = 7e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39528 TTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAA 39587 |||||| || ||||| |||||||| | | | | || || | |||||| ||| | || Sbjct 25114949 TTCTTTCTGGATATTGTAATCGGCGAGAGTTCTGCCGTCTTCGAGTTGTTTACCGGCGAA 25115008 Query 39588 AATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGT 39647 || |||||||||||||||| || | |||||| ||||| ||||| ||| | | Sbjct 25115009 GATCAAACGCTGCTGATCCGGTGGAATGCCTTCCTTGTCTTGGATTTTAGCTTTCACGTT 25115068 Query 39648 CGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTAC 39707 | | |||||| | | || || || | ||||| |||||||| |||| ||||| || Sbjct 25115069 ATCGATTGTGTCGGAGGACTCGACCTCTAGCGTAATCGTTTTACCGGTTAGGGTTTTGAC 25115128 Query 39708 GAAGATCTGCAT 39719 |||||||||||| Sbjct 25115129 GAAGATCTGCAT 25115140 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 39529 TCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAA 39588 ||||| || || || || || || | | | | |||| |||| ||| ||||| |||| Sbjct 29044905 TCTTTCTGAATGTTGTAGTCAGCAAGAGTCCTTCCATCCTCCAGTTGCTTCCCAGCAAAG 29044964 Query 39589 ATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTC 39648 || || | ||| || || | ||| | ||||| ||||| ||||||| || | | Sbjct 29044965 ATCAACCTCTGTTGGTCTGGGGGGATACCTTCCTTGTCCTGTATTTTTGCCTTGACATTA 29045024 Query 39649 GCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACG 39708 | | |||||||| ||||| || ||||| || || ||||| || || ||||| || || Sbjct 29045025 TCAATTGTGTCTGAACTTTCAACCTCCAAGGTGATAGTTTTTCCTGTCAAAGTCTTCACA 29045084 Query 39709 AAGATCTGCAT 39719 ||||||||||| Sbjct 29045085 AAGATCTGCAT 29045095 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 39529 TCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAA 39588 ||||| || || || || || || | | | | |||| |||| ||| ||||| |||| Sbjct 29058839 TCTTTCTGAATGTTGTAGTCAGCAAGAGTCCTTCCATCCTCCAGTTGCTTCCCAGCAAAG 29058898 Query 39589 ATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTC 39648 || || | ||| || || | ||| | ||||| ||||| ||||||| || | | Sbjct 29058899 ATCAACCTCTGTTGGTCTGGGGGGATACCTTCCTTGTCCTGTATTTTTGCCTTGACATTA 29058958 Query 39649 GCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACG 39708 | | |||||||| ||||| || ||||| || || ||||| || || ||||| || || Sbjct 29058959 TCAATTGTGTCTGAACTTTCAACCTCCAAGGTGATAGTTTTCCCTGTCAAAGTCTTCACA 29059018 Query 39709 AAGATCTGCAT 39719 ||||||||||| Sbjct 29059019 AAGATCTGCAT 29059029 >seq7 Length=44630203 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 39529 TCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAA 39588 ||||| || || || || || || | | | | |||| |||||||| ||||| |||| Sbjct 36856462 TCTTTCTGAATGTTGTAGTCAGCAAGAGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAT 36856403 Query 39589 ATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTC 39648 || || | |||||| || | || | || || ||||| |||||| ||| | | Sbjct 36856402 ATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATTTTTGCTTTGACATTA 36856343 Query 39649 GCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACG 39708 | | |||||||| |||||| || ||||| ||||| || || || || ||||| || || Sbjct 36856342 TCGATTGTGTCTGAGCTTTCAACTTCCAAGGTAATAGTCTTGCCTGTCAAAGTCTTCACA 36856283 Query 39709 AAGATCTGCAT 39719 ||||||||||| Sbjct 36856282 AAGATCTGCAT 36856272 >seq17 Length=41641078 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 39511 ACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCC 39570 |||||||||| |||| || || || ||||||||||| || | | || |||| ||| Sbjct 3125136 ACCAAATGCAGAGTGGACTCCTTCTGGATATTATAATCAGCAAGAGTACGACCATCTTCC 3125077 Query 39571 AATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCAT 39630 | || ||||| |||| || | | |||||| || | || | || |||||||| | Sbjct 3125076 AGCTGCTTCCCAGCAAAGATAAGCCTCTGCTGGTCTGGTGGAATCCCCTCTTTGTCCTGT 3125017 Query 39631 ATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTA 39690 || ||| || | | | | || || | ||||| || || ||||| |||||||| Sbjct 3125016 ATCTTTGCCTTCACGTTATCGATGGTATCAGAACTTTCAACTTCTAAAGTTATTGTTTTT 3124957 Query 39691 CCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 || || ||||| || || ||||| |||||| Sbjct 3124956 CCGGTCAAAGTCTTAACAAAGATTTGCATG 3124927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347364557821703