Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq1190 554 5e-153 seq13 408 5e-109 seq14 327 1e-84 seq11 313 3e-80 seq2 150 2e-31 seq15 82.4 9e-11 >seq1190 Length=152218 Score = 554 bits (614), Expect = 5e-153 Identities = 717/985 (73%), Gaps = 4/985 (0%) Strand=Plus/Minus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| |||| ||||| | || | ||||| |||| ||||| ||||| || Sbjct 1328 TTCTGTAACTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 1269 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACC 168609 ||||| || |||||| || ||| | | ||| || ||| | || ||||||||||| || Sbjct 1268 ATGATTCCTACTTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTTATTGCTGCCCC 1210 Query 168610 ACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAA 168669 || || ||||| || || || | || ||||| | || ||||| | ||||||||||| Sbjct 1209 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 1150 Query 168670 CATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAAT 168729 ||||| || ||||| || |||| |||| || || ||| | ||||| || || || Sbjct 1149 TATCATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATAGGTTTGCACTTTTATCCTAT 1090 Query 168730 TTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAAT 168789 ||||||||| || | | ||||| |||||||| || || |||||||| | | | | Sbjct 1089 TTGGGAAGCGGCATCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 1030 Query 168790 CTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAA-TTATCATACA 168848 | |||||| || | || | || ||||||||| | |||||||| ||| | | Sbjct 1029 TCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGGCGTGAGTGGGAACTTAGTTTTC- 971 Query 168849 GACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTG 168908 | | |||||| | |||||||| |||||| |||||||| || || | || || || Sbjct 970 GTTTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTG 911 Query 168909 CAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAA 168968 | || ||| | | || || |||||||||| || || ||||||||||||||||||| Sbjct 910 CTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGGAA 851 Query 168969 TTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATC 169028 |||| || || ||||| || ||| | ||||| || || ||||| || ||||||||||||| Sbjct 850 TTTCAGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATC 791 Query 169029 CCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATG 169088 | || || ||| ||| ||||| ||| | ||||| || || |||||| || ||||||| Sbjct 790 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 731 Query 169089 GTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATG 169148 |||| | ||||| ||| | | ||||| || || || || | |||||| || | | Sbjct 730 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 671 Query 169149 GTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCG 169208 |||||| || |||||||| |||||||||||||||||||| || || ||||| || || | Sbjct 670 GTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTG 611 Query 169209 GTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAG 169268 | |||| |||||||| ||||||||||||||||| || | | | || |||||| ||| Sbjct 610 GCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAG 551 Query 169269 CAGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCA 169328 | | | || || ||| || | ||||| ||| || | |||||| | || ||||| |||| Sbjct 550 CTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCA 491 Query 169329 ACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTA 169388 |||| || || || || || |||||||| || || ||| | | ||| | ||| || Sbjct 490 ACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATA 431 Query 169389 CATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACG 169448 | |||| ||| | ||||| |||| |||||||||||||||||||||||||| ||||| | Sbjct 430 CCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATG 371 Query 169449 CTCACAACTTCCCACTAGACTTAGC 169473 |||| || ||||| ||||| |||| Sbjct 370 CTCATAATTTCCCTCTAGATCTAGC 346 >seq13 Length=45874162 Score = 408 bits (452), Expect = 5e-109 Identities = 617/879 (70%), Gaps = 20/879 (2%) Strand=Plus/Plus Query 168596 TTTATTGCTGCACCACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTA 168655 ||||||||||| || | || ||||| || || || | || ||||| | || ||||| Sbjct 7358216 TTTATTGCTGCCCCTCTAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTA 7358275 Query 168656 ATGTATGGAAACAACATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTA 168715 | ||||||||||| ||||| || ||||| || |||| |||| || || ||| | Sbjct 7358276 CTTTATGGAAACAATATCATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATAGGTTTG 7358335 Query 168716 CACTTCTACCCAATTTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCT 168775 ||||| || || ||||||||||| || | | ||||| ||||||||||| || |||||| Sbjct 7358336 CACTTTTATCCTATTTGGGAAGCGGCATCTGTTGATGAATGGTTATATAACGGCGGTCCT 7358395 Query 168776 TACCAGTTGGTAATCTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGG 168835 || | | | || | |||||| || | || | || ||||||||| | ||||| Sbjct 7358396 TATGAACTAATTATTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGGCGTGAGTGG 7358455 Query 168836 GAA-TTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGT 168894 ||| ||| | | | | |||||| | ||||| || |||||| Sbjct 7358456 GAACTTAGTTTTC-GTTTGGGTATGCGTCCTTGAATTGCTGTTGCA-------------- 7358500 Query 168895 ATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGG 168954 || || ||| || ||| | | || || |||||||||| || || ||||| Sbjct 7358501 ----GCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGATGG 7358556 Query 168955 TATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAA 169014 |||||||||||||||||| || || | ||| || ||| | ||||| || || |||| || Sbjct 7358557 TATGCCTCTAGGAATTTCAGGTACTTCCAATTTTATGATTGTATTTCAGGCTAAGCATAA 7358616 Query 169015 CATTCTTATGCATCCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATT 169074 |||||||||||||| || || ||| | ||||| ||| | ||||| || || |||| Sbjct 7358617 TATTCTTATGCATCCATTTCACATGTTGGTTGTAGCTGGTGTATTCGGCGGCTCCTTATT 7358676 Query 169075 CTCCGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGA 169134 || ||||||| ||| | ||||| | | | | ||||| || || || || | || Sbjct 7358677 TAGTGCTATGCATGATTCCTTGGTAACTTTTAGTTTGATCAGGGAAACCACAGAAAATGA 7358736 Query 169135 ATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGC 169194 |||| || | ||||||| || |||||||| || ||||||||||||||||| | || Sbjct 7358737 ATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAGGAAACCTATAATATTGTAGTTGC 7358796 Query 169195 ACATGGATACTTCGGTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCT 169254 ||||| || || || |||| |||||||| ||||||||||||||||| || | | | Sbjct 7358797 TCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTT 7358856 Query 169255 TCACTTCTTCCTAGCAGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTG 169314 || |||||| | || | | || | ||| || | ||||| ||| || | |||||| Sbjct 7358857 ACATTTCTTCTTTGCTGCTTGGCCTATAGTAGGTATTTGGTTTACCGCTTTAGGTATCAA 7358916 Query 169315 TACAATGGCATTCAACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGG 169374 || ||||| |||||||| || || || || || |||||||| || || ||| | | || Sbjct 7358917 CACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGG 7358976 Query 169375 TAAGATCATTCCTACATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAAT 169434 | | ||| ||| |||| ||| | ||||| |||| |||||||||||||||||||| Sbjct 7358977 TCGTGTAATTAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAAT 7359036 Query 169435 GCATGAGCGTAACGCTCACAACTTCCCACTAGACTTAGC 169473 |||||| ||||| ||||| || ||||| ||||| |||| Sbjct 7359037 GCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGC 7359075 >seq14 Length=49042192 Score = 327 bits (362), Expect = 1e-84 Identities = 440/610 (72%), Gaps = 2/610 (0%) Strand=Plus/Plus Query 168677 TCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATTTGGGAA 168736 || ||||| || |||| |||| || || ||| | ||||| || || ||||||||| Sbjct 41705868 TCTGGTGCCATTATTCCTACTTCTGCGGCTATAGGTTTGCACTTTTATCCTATTTGGGAA 41705927 Query 168737 GCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAATCTTCCAC 168796 || || | || ||||| ||||||||||| || | |||||| | | | | | ||| Sbjct 41705928 GCGGCATCTATTGATGAATGGTTATATAACGGCGATCCTTATGAACTAATTGTTCTACAC 41705987 Query 168797 TTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAA-TTATCATACAGACTAGG 168855 ||| || | || | || ||||||||| | |||||||| ||| | | | | || Sbjct 41705988 TTCTTACTTGGTGTAGCTTGCTACATGGGGCGTGAGTGGGAACTTAGTTTTC-GTTTGGG 41706046 Query 168856 TATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCAGTATT 168915 |||| | |||| ||| |||||| |||||||| || || | || || ||| || || Sbjct 41706047 TATGCGTCCTTCGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTT 41706106 Query 168916 CCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATTTCTGG 168975 | || | || || |||||||||| || || |||||||||||||||||||||| || Sbjct 41706107 CTTTATCTATCCTATTGGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGGAATTTTAGG 41706166 Query 168976 AACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCCTTCCA 169035 || ||||| || ||| | ||||| || || ||||| || |||||||||||||| || || Sbjct 41706167 TACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCA 41706226 Query 169036 TATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGTTCACT 169095 ||| ||| ||||| ||| | ||||| || || |||||| | ||||||||||| | Sbjct 41706227 CATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGATATGCATGGTTCCTT 41706286 Query 169096 TGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGTTACAA 169155 ||||| |||| | | ||||| || || || || | |||||| || | ||||||| Sbjct 41706287 GGTAACTTCTTGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAG 41706346 Query 169156 GTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGATT 169215 || |||||||| |||||||||||||||||||| || || ||||| || || || |||| Sbjct 41706347 ATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATT 41706406 Query 169216 AATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTGTT 169275 |||||||| ||||||||||||||||| | | | | || |||||| |||| | | Sbjct 41706407 GATCTTCCAATATGCAAGTTTCAACAATTGTCGTTCTTTACATTTCTTCTTAGCTGCTTG 41706466 Query 169276 CCCAGTTGTA 169285 ||||| ||| Sbjct 41706467 GCCAGTAGTA 41706476 >seq11 Length=34766867 Score = 313 bits (346), Expect = 3e-80 Identities = 395/540 (73%), Gaps = 2/540 (0%) Strand=Plus/Minus Query 168704 GCAATCGGTCTACACTTCTACCCAATTTGGGAAGCAGCTACAATCGATGAGTGGTTATAT 168763 || || ||| | ||||| || || ||||||||||| || | | ||||| ||||||||| Sbjct 15042888 GCTATAGGTTTGCACTTTTATCCTATTTGGGAAGCGGCATCTGTTGATGAATGGTTATAT 15042829 Query 168764 AATGGTGGTCCTTACCAGTTGGTAATCTTCCACTTCCTAATCGGAATCTCTGCCTACATG 168823 | ||||||||||| | | | | | |||||| || | || | || ||||||| Sbjct 15042828 AGCGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATG 15042769 Query 168824 GGTAGACAGTGGGAA-TTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTA 168882 || | |||||||| ||| | | | | || ||| | |||| ||| |||||| || Sbjct 15042768 GGGTGTGAGTGGGAACTTAGTTTTC-GTTTGGGCATGCGTCCTTCGATTGCTGTTGCATA 15042710 Query 168883 TTCAGCACCAGTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTC 168942 |||||| || || | || || ||| || ||| | | || || |||||||||| Sbjct 15042709 TTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAG 15042650 Query 168943 TTTCTCTGATGGTATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGTTCGTATTCCA 169002 || || ||||||||||||||| |||||| || || ||||| || ||| | ||||| || Sbjct 15042649 CTTTTCAGATGGTATGCCTCTAAGAATTTTAGGTACTTTCAATTTTATGATTGTATTTCA 15042590 Query 169003 AGCAGAGCACAACATTCTTATGCATCCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGG 169062 || ||||| || |||||||||||||| || || ||| ||| ||||| ||| | ||||| Sbjct 15042589 GGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGG 15042530 Query 169063 TGGATCTCTATTCTCCGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAGAC 169122 || || |||||| || ||||||||||| | ||||| |||| | | ||||| || || Sbjct 15042529 CGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTTGTTTGATCAGGGAAAC 15042470 Query 169123 TACTGAGGAAGAATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAA 169182 || || | |||||| || | ||||||| || |||||||| |||||||||||||| Sbjct 15042469 CACAGAAAATGAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAA 15042410 Query 169183 TATTGTTGCAGCACATGGATACTTCGGTAGATTAATCTTCCAGTATGCAAGTTTCAACAA 169242 |||||| || || ||||| || || || |||| |||||||| ||||||||||||||||| Sbjct 15042409 TATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAA 15042350 >seq2 Length=48577505 Score = 150 bits (166), Expect = 2e-31 Identities = 190/261 (73%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 168907 TGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGG 168966 ||| || ||| | | || || |||||||||| || || ||||||||||||||||| Sbjct 24951519 TGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGG 24951460 Query 168967 AATTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCA 169026 |||||| | || ||||| || ||| | ||||| || || |||| || ||||||||||| Sbjct 24951459 AATTTCAGATACTTTCAATTTTATGATTGTATTTCAGGCTAAGCATAATATTCTTATGCA 24951400 Query 169027 TCCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCA 169086 ||| || || ||| ||| ||||| ||| | ||||| || || |||||| || ||| | Sbjct 24951399 TCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGTA 24951340 Query 169087 TGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTA 169146 |||||| | ||||| | | | | ||||| || || || || | |||||| || | Sbjct 24951339 TGGTTCCTTGGTAACTTTTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGA 24951280 Query 169147 TGGTTACAAGTTCGGTCAAGA 169167 ||||||| || |||||||| Sbjct 24951279 AGGTTACAGATTTGGTCAAGA 24951259 >seq15 Length=51756343 Score = 82.4 bits (90), Expect = 9e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 169148 GGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTC 169207 ||||||| || |||||||| |||||||| |||||||||| | | ||||| || || Sbjct 19465063 GGTTACATATTTGGTCAAGAGAAAGAAACCAATAATATTGTAGTCGTTCATGGTTATTTT 19465004 Query 169208 GGTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTC 169245 || ||| || ||||| ||||||||||||||||| || Sbjct 19465003 GGCCCATTGATATTCCAATATGCAAGTTTCAACAATTC 19464966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564433196875680