Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq1190 448 1e-121 seq13 338 2e-88 seq14 248 3e-61 seq11 241 4e-59 >seq1190 Length=152218 Score = 448 bits (496), Expect = 1e-121 Identities = 697/987 (71%), Gaps = 8/987 (1%) Strand=Plus/Minus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || ||| | ||| | || || || || || ||||| || | |||||||| || || | Sbjct 1328 TTCTGTAACTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 1269 Query 25862 ATGATACCCTGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACC 25920 ||||| || ||| | | || ||| | ||| ||||| | || || || || || || Sbjct 1268 ATGATTCCTACTTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTTATTGCTGCCCC 1210 Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980 || |||||||| ||||| || |||||||| ||||| || || || | || |||||||| Sbjct 1209 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 1150 Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040 ||| || || || || | | || | ||| || || || | || ||||| || || Sbjct 1149 TATCATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATAGGTTTGCACTTTTATCCTAT 1090 Query 26041 CTGGGAAGCTGGCA-CACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTA 26099 |||||||| |||| | | || || ||| ||||||| ||||| || ||| |||| ||| Sbjct 1089 TTGGGAAGC-GGCATCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTG 1031 Query 26100 TCTTCCACTTCTTAATAGGAGTAGC-AGC-ATATGCAGGGAGACAGTGGGAACTATCTTA 26157 | | ||||||||| | || ||||| || | ||| ||| | |||||||||| || Sbjct 1030 TTCTACACTTCTTACTTGGTGTAGCTTGCTACATG--GGGCGTGAGTGGGAACTTAGTTT 973 Query 26158 CAGACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCT 26217 | | || ||| | || ||||| |||||||||| |||| || | | || ||| Sbjct 972 TCGTTTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTAC 913 Query 26218 CGCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGG 26277 || || ||||| | |||||| | || || || || ||| ||||| |||||||| || Sbjct 912 TGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGG 853 Query 26278 TATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCA 26337 || || |||||||| || |||||| | ||||| || || || |||||||| || ||||| Sbjct 852 AATTTCAGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCA 793 Query 26338 CCCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCA 26397 ||||| || ||| ||||| ||||| || ||||| || | || ||| ||||||||| Sbjct 792 TCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 733 Query 26398 CGGAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTA 26457 || ||||| ||||| | || ||||| ||||| | | || ||| | Sbjct 732 TGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGA 673 Query 26458 TGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTT 26517 || || | ||||| ||||| ||||| || ||||||||||| ||||| || || || || Sbjct 672 AGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTT 613 Query 26518 TGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCT 26577 ||| |||| || || || ||||| ||||| || || |||||| | |||||||| | Sbjct 612 TGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTT 553 Query 26578 TGCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATT 26637 ||| ||||||| || || || || ||| | || || | |||||| |||| ||||| || Sbjct 552 AGCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTT 493 Query 26638 TAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACC 26697 ||| |||||||||| || || ||||| || ||||| ||| | | || |||| Sbjct 492 CAACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAA 433 Query 26698 TACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAA 26757 ||| ||||||||| | | |||||||||||||| || | ||||| ||||| || ||||| Sbjct 432 TACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAA 373 Query 26758 TGCTCATAACTTTCCACTTGACTTAGC 26784 ||||||||| || || || || |||| Sbjct 372 TGCTCATAATTTCCCTCTAGATCTAGC 346 >seq13 Length=45874162 Score = 338 bits (374), Expect = 2e-88 Identities = 608/883 (69%), Gaps = 28/883 (3%) Strand=Plus/Plus Query 25907 TTCATCGCAGCACCGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTA 25966 || || || || || | |||||||| ||||| || |||||||| ||||| || || || Sbjct 7358216 TTTATTGCTGCCCCTCTAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTA 7358275 Query 25967 ATGTACGGAAACAATATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTA 26026 | || ||||||||||| || || || || | | || | ||| || || || | Sbjct 7358276 CTTTATGGAAACAATATCATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATAGGTTTG 7358335 Query 26027 CATTTTTACCCGATCTGGGAAGCTGGCA-CACTGGACGAGTGGCTATACAATGGCGGACC 26085 || ||||| || || |||||||| |||| | | || || ||| |||| || ||||| || Sbjct 7358336 CACTTTTATCCTATTTGGGAAGC-GGCATCTGTTGATGAATGGTTATATAACGGCGGTCC 7358394 Query 26086 ATATCAACTCATTATCTTCCACTTCTTAATAGGAGTAGCA-GC-ATATGCAGGGAGACAG 26143 ||| |||| ||||| | ||||||||| | || ||||| || | ||| ||| | || Sbjct 7358395 TTATGAACTAATTATTCTACACTTCTTACTTGGTGTAGCTTGCTACATG--GGGCGTGAG 7358452 Query 26144 TGGGAACTATCTTACAGACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCA 26203 |||||||| || | | || ||| | || || || ||||||| Sbjct 7358453 TGGGAACTTAGTTTTCGTTTGGGTATGCGTCCTTGAATTGCTGTTGCAG----------- 7358501 Query 26204 CTATCCGCAGCTCTCGCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGAT 26263 |||| || || || ||||| | |||||| | || || || || ||| ||| Sbjct 7358502 ----CCGCTACT---GCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGAT 7358554 Query 26264 GGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACAT 26323 || |||||||| || || || ||||||| || |||||| | ||||| || || | ||| Sbjct 7358555 GGTATGCCTCTAGGAATTTCAGGTACTTCCAATTTTATGATTGTATTTCAGGCTAAGCAT 7358614 Query 26324 AATATACTCATGCACCCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTT 26383 ||||| || ||||| ||||| || ||| | ||| ||||| || ||||| || | | Sbjct 7358615 AATATTCTTATGCATCCATTTCACATGTTGGTTGTAGCTGGTGTATTCGGCGGCTCCTTA 7358674 Query 26384 TTCGCTGCTATGCACGGAAGTTTGGTTACTTCCTCACTTATTGCAG--AAACGACAGAGG 26441 || ||||||||| | ||||| |||| | | || ||| |||| ||||| Sbjct 7358675 TTTAGTGCTATGCATGATTCCTTGGTAACTT--TTAGTTTGATCAGGGAAACCACAGAAA 7358732 Query 26442 AAGTCTCACAGAATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCG 26501 | | || ||| | || || | ||||| ||||| || || || ||||||||||| | Sbjct 7358733 ATGAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAGGAAACCTATAATATTGTAG 7358792 Query 26502 CTGCACACGGGTACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTT 26561 ||| || || || ||||| |||| || || || ||||| ||||| || || |||| Sbjct 7358793 TTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTT 7358852 Query 26562 CTCTTCATTTCTTTCTTGCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTA 26621 || | |||||||| ||||| ||||||| | || || || ||| | || || | |||| Sbjct 7358853 CTTTACATTTCTTCTTTGCTGCTTGGCCTATAGTAGGTATTTGGTTTACCGCTTTAGGTA 7358912 Query 26622 TCTGCACAATGGCATTTAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTA 26681 || ||| ||||| || ||| |||||||||| || || ||||| || ||||| ||| | Sbjct 7358913 TCAACACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTC 7358972 Query 26682 ATGGAAAGATAATACCTACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAG 26741 | || |||| ||| ||||||||| | | |||||||||||||| || | |||| Sbjct 7358973 AAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAG 7359032 Query 26742 TTATGCACGAGCGTAATGCTCATAACTTTCCACTTGACTTAGC 26784 | ||||| || |||||||||||||| || || || || |||| Sbjct 7359033 TAATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGC 7359075 >seq14 Length=49042192 Score = 248 bits (274), Expect = 3e-61 Identities = 402/572 (70%), Gaps = 6/572 (1%) Strand=Plus/Plus Query 26027 CATTTTTACCCGATCTGGGAAGCTGGCA-CACTGGACGAGTGGCTATACAATGGCGGACC 26085 || ||||| || || |||||||| |||| | | || || ||| |||| || |||| || Sbjct 41705907 CACTTTTATCCTATTTGGGAAGC-GGCATCTATTGATGAATGGTTATATAACGGCGATCC 41705965 Query 26086 ATATCAACTCATTATCTTCCACTTCTTAATAGGAGTAGCA-GC-ATATGCAGGGAGACAG 26143 ||| |||| ||| | | ||||||||| | || ||||| || | ||| ||| | || Sbjct 41705966 TTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATG--GGGCGTGAG 41706023 Query 26144 TGGGAACTATCTTACAGACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCA 26203 |||||||| || | | || ||| | || | ||| |||||||||| |||| || Sbjct 41706024 TGGGAACTTAGTTTTCGTTTGGGTATGCGTCCTTCGATTGCTGTTGCATATTCAGCTCCT 41706083 Query 26204 CTATCCGCAGCTCTCGCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGAT 26263 | | || ||| || || ||||| | |||||| | || || || || ||| ||| Sbjct 41706084 GTTGCAGCCGCTACTGCTGTTTTCTTTATCTATCCTATTGGTCAGGGAAGCTTTTCAGAT 41706143 Query 26264 GGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACAT 26323 || |||||||| || || | |||||||| || |||||| | ||||| || || || ||| Sbjct 41706144 GGTATGCCTCTAGGAATTTTAGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCAT 41706203 Query 26324 AATATACTCATGCACCCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTT 26383 ||||| || ||||| ||||| || ||| ||||| ||||| || ||||| || | || Sbjct 41706204 AATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTA 41706263 Query 26384 TTCGCTGCTATGCACGGAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAA 26443 ||| || |||||| || ||||| ||||| | | || ||||| ||||| | Sbjct 41706264 TTCAGTGATATGCATGGTTCCTTGGTAACTTCTTGTTTGATCAGGGAAACCACAGAAAAT 41706323 Query 26444 GTCTCACAGAATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCT 26503 | || ||| | || || | ||||| ||||| ||||| || ||||||||||| ||| Sbjct 41706324 GAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCT 41706383 Query 26504 GCACACGGGTACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCT 26563 || || || || ||||| |||| || || || ||||| ||||| || || | |||||| Sbjct 41706384 GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTGTCGTTCT 41706443 Query 26564 CTTCATTTCTTTCTTGCTACTTGGCCGGTTGT 26595 | |||||||| | ||| ||||||| || || Sbjct 41706444 TTACATTTCTTCTTAGCTGCTTGGCCAGTAGT 41706475 >seq11 Length=34766867 Score = 241 bits (266), Expect = 4e-59 Identities = 396/565 (70%), Gaps = 6/565 (1%) Strand=Plus/Minus Query 26027 CATTTTTACCCGATCTGGGAAGCTGGCA-CACTGGACGAGTGGCTATACAATGGCGGACC 26085 || ||||| || || |||||||| |||| | | || || ||| |||| | || || || Sbjct 15042876 CACTTTTATCCTATTTGGGAAGC-GGCATCTGTTGATGAATGGTTATATAGCGGTGGTCC 15042818 Query 26086 ATATCAACTCATTATCTTCCACTTCTTAATAGGAGTAGCA-GC-ATATGCAGGGAGACAG 26143 ||| |||| ||| | | ||||||||| | || ||||| || | ||| ||| | || Sbjct 15042817 TTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATG--GGGTGTGAG 15042760 Query 26144 TGGGAACTATCTTACAGACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCA 26203 |||||||| || | | || ||| | || | ||| |||||||||| |||| || Sbjct 15042759 TGGGAACTTAGTTTTCGTTTGGGCATGCGTCCTTCGATTGCTGTTGCATATTCAGCTCCT 15042700 Query 26204 CTATCCGCAGCTCTCGCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGAT 26263 | | || ||| || || ||||| | |||||| | || || || || ||| ||| Sbjct 15042699 GTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGAT 15042640 Query 26264 GGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACAT 26323 || |||||||| | || | |||||||| || |||||| | ||||| || || || ||| Sbjct 15042639 GGTATGCCTCTAAGAATTTTAGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCAT 15042580 Query 26324 AATATACTCATGCACCCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTT 26383 ||||| || ||||| ||||| || ||| ||||| ||||| || ||||| || | || Sbjct 15042579 AATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTA 15042520 Query 26384 TTCGCTGCTATGCACGGAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAA 26443 ||| ||||||||| || ||||| ||||| | | || ||||| ||||| | Sbjct 15042519 TTCAGTGCTATGCATGGTTCCTTGGTAACTTCTTGTTTGATCAGGGAAACCACAGAAAAT 15042460 Query 26444 GTCTCACAGAATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCT 26503 | || ||| | || || | ||||| ||||| ||||| || ||||||||||| ||| Sbjct 15042459 GAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCT 15042400 Query 26504 GCACACGGGTACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCT 26563 || || || || ||||| |||| || || || ||||| ||||| || || | |||||| Sbjct 15042399 GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTGTCGTTCT 15042340 Query 26564 CTTCATTTCTTTCTTGCTACTTGGC 26588 | |||||||| | ||| |||||| Sbjct 15042339 TTACATTTCTTCTTAGCTGCTTGGC 15042315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146724324830184