Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq1190 545 7e-151 seq13 437 3e-118 seq14 351 3e-92 seq11 338 2e-88 seq2 154 4e-33 >seq1190 Length=152218 Score = 545 bits (604), Expect = 7e-151 Identities = 715/989 (72%), Gaps = 6/989 (1%) Strand=Plus/Plus Query 35970 GCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAG 36029 || ||||| || || ||||| || || || ||||| |||||||| |||||||| || | | Sbjct 343 GCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATTACTTCCATACCAAGG 402 Query 36030 TCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACT 36089 | || ||||||| ||| |||||||| || | || | || | |||||| || Sbjct 403 TTAGCTCGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACG 462 Query 36090 GACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTA 36149 || || ||||| || || || || | || |||||||||||| || || | ||||||| Sbjct 463 GATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCGGTA 522 Query 36150 AGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTA 36209 | ||| || | || ||||||||||| | ||||||||||||| || ||| || Sbjct 523 AACCAAATACCTACTACAGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAATTGTTG 582 Query 36210 AAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATAC 36269 || || ||||| |||||||| | || ||||| || |||||||| || ||||| ||||| Sbjct 583 AAACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAG 642 Query 36270 GTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCA 36329 || ||||| ||||| || ||| | || || | || ||||||| | || ||||| Sbjct 643 GTTTCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCC 702 Query 36330 CGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAAT 36389 | || | ||||| || | || ||||||||| ||||| | || |||||| Sbjct 703 CTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAAT 762 Query 36390 ACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAG 36449 || || || ||||| | ||| || || ||||||||||| ||||| || || |||||||| Sbjct 763 ACACCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGAAAT 822 Query 36450 ACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCT 36509 |||| ||||||||||||||| |||||||| || |||||||||||||| || || || || Sbjct 823 ACAATCATAAAATTGAAAGTACCTGAAATTCCTAGAGGCATACCATCTGAAAAGCTTCCC 882 Query 36510 TGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCT 36569 || |||| ||| |||| ||||| |||||| || ||||||||||| |||||||| || Sbjct 883 TGACCAATAGGATAGATCAAGAAAACAGCAGTAGCGGCTGCAACAGGAGCTGAATATGCA 942 Query 36570 ACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCA---AG 36626 ||| ||||| || | |||||| | | | ||||||||||||| | || |||| || Sbjct 943 ACAGCAATCCAAGGACGCATACCCAAACGAAAACTAAGTTCCCACTCACGCCCCATGTAG 1002 Query 36627 TAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATAT 36686 ||||| | ||||| | ||||| | ||||| |||| ||| || || ||||| ||| Sbjct 1003 CAAGCT---ACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTAT 1059 Query 36687 AACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTC 36746 ||||| || || | | ||| |||||||| || || || ||||| | ||| || || Sbjct 1060 AACCATTCATCAACAGATGCCGCTTCCCAAATAGGATAAAAGTGCAAACCTATAGCCGCA 1119 Query 36747 GATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACA 36806 || | || | || || ||||| ||||| ||||||||||| |||| | ||| || ||| Sbjct 1120 GAAGTAGGAATAATGGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAAACA 1179 Query 36807 GGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCT 36866 ||||||||||||||||| ||||| || ||||| ||||||| ||| || || | |||| | Sbjct 1180 GGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATAAAAGCGATAATAAATACA 1239 Query 36867 GTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGG 36926 | ||| || || | | ||| ||||| | || |||||||| || | || || || Sbjct 1240 GAAGTTGCGGTCAATAAAGTAGGAATCATCAAAACACCAAACCATCCAATGTAAAGACGA 1299 Query 36927 TTGTTTGTACTTGTAACCCAGTCACATAA 36955 || | || || || | ||||| ||| || Sbjct 1300 TTTTCGGTGCTGGTTATCCAGTTACAGAA 1328 >seq13 Length=45874162 Score = 437 bits (484), Expect = 3e-118 Identities = 639/900 (71%), Gaps = 30/900 (3%) Strand=Plus/Minus Query 35970 GCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAG 36029 || ||||| || || ||||| || || || ||||| |||||||| |||||||| || | | Sbjct 7359078 GCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATTACTTCCATACCAAGG 7359019 Query 36030 TCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACT 36089 | || ||||||| ||| |||||||| || | || | || | |||||| || Sbjct 7359018 TTAGCTCGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACG 7358959 Query 36090 GACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTA 36149 || || ||||| || || || || | || |||||||||||| || || | ||||||| Sbjct 7358958 GATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGTTGATACCTAAAGCGGTA 7358899 Query 36150 AGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTA 36209 | ||| || | | ||||||||||| | ||||||||||||| || ||| || Sbjct 7358898 AACCAAATACCTACTATAGGCCAAGCAGCAAAGAAGAAATGTAAAGAACGAGAATTGTTG 7358839 Query 36210 AAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATAC 36269 || || ||||| |||||||| | || ||||| || |||||||| | ||||| ||||| Sbjct 7358838 AAACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAACTACAATATTATAG 7358779 Query 36270 GTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCA 36329 || || || ||||| || ||| | || || | || ||||||| | || ||||| Sbjct 7358778 GTTTCCTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCC 7358719 Query 36330 CGAAT--AAGTGAGGAAGTAAC-AAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCG 36386 | || || | | |||| || ||| || ||||||||| ||||| | || ||| Sbjct 7358718 CTGATCAAACTAA--AAGTTACCAAGGAATCA-TGCATAGCACTAAATAAGGAGCCGCCG 7358662 Query 36387 AATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGA 36446 ||||| || || ||| | | ||| || || ||||||||||| ||||| || | |||||| Sbjct 7358661 AATACACCAGCTACAACCAACATGTGAAATGGATGCATAAGAATATTATGCTTAGCCTGA 7358602 Query 36447 AAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTC 36506 || |||| |||||||||| |||| |||||||| || |||||||||||||| || || || Sbjct 7358601 AATACAATCATAAAATTGGAAGTACCTGAAATTCCTAGAGGCATACCATCTGAAAAGCTT 7358542 Query 36507 CCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAA 36566 || || |||| ||| |||| ||||| |||||| || |||||||||| Sbjct 7358541 CCCTGACCAATAGGATAGATCAAGAAAACAGCAGTAGCGGCTGCAACAG----------- 7358493 Query 36567 GCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCA-- 36624 || || || || | |||||| | | | ||||||||||||| | || |||| Sbjct 7358492 ----CA---ATTCAAGGACGCATACCCAAACGAAAACTAAGTTCCCACTCACGCCCCATG 7358440 Query 36625 -AGTAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTA 36683 || ||||| | ||||| | ||||| | | ||| |||| ||| || || |||||| Sbjct 7358439 TAGCAAGCT---ACACCAAGTAAGAAGTGTAGAATAATTAGTTCATAAGGACCGCCGTTA 7358383 Query 36684 TATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCG 36743 |||||||| || || | | ||| |||||||| || || || ||||| | ||| || || Sbjct 7358382 TATAACCATTCATCAACAGATGCCGCTTCCCAAATAGGATAAAAGTGCAAACCTATAGCC 7358323 Query 36744 TTCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAG 36803 || | || | || || ||||| ||||| ||||||||||| |||| | ||| || Sbjct 7358322 GCAGAAGTAGGAATAATGGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAA 7358263 Query 36804 ACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAAT 36863 |||||||||||||||||||| ||||| || |||| ||||||| ||| | || | |||| Sbjct 7358262 ACAGGCTCACGAATACCATCAATATCTACTAGAGGGGCAGCAATAAAAGTGATGATAAAT 7358203 >seq14 Length=49042192 Score = 351 bits (388), Expect = 3e-92 Identities = 427/581 (73%), Gaps = 6/581 (1%) Strand=Plus/Minus Query 36165 ACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAGCTAGCATACTGG 36224 || ||||||||||| | ||||||||||||| || | ||| || || || ||||| ||| Sbjct 41706472 ACTGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGACAATTGTTGAAACTTGCATATTGG 41706413 Query 36225 AAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTCTCTTCTTCTTGG 36284 ||||| | || ||||| || |||||||| || ||||| ||||| || ||||| ||||| Sbjct 41706412 AAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAGGTTTCTTCCTCTTGA 41706353 Query 36285 CCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGAATAAGTGAGGAA 36344 || ||| | || || | || ||||||| | || ||||| | || | | ||| Sbjct 41706352 CCAAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACAAGAA 41706293 Query 36345 GTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCG 36404 || || | || |||||| || ||||| | || |||||||| || || ||||| Sbjct 41706292 GTTACCAAGGAACCATGCATATCACTGAATAGGGAGCCGCCGAATACACCAGCTACACCT 41706233 Query 36405 AGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTG 36464 | ||| || || ||||||||||| ||||| || || |||||||| |||| |||||||||| Sbjct 41706232 AACATGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTG 41706173 Query 36465 AAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAG 36524 ||||| ||| |||| || |||||||||||||| || || || || || |||| ||| ||| Sbjct 41706172 AAAGTACCTAAAATTCCTAGAGGCATACCATCTGAAAAGCTTCCCTGACCAATAGGATAG 41706113 Query 36525 ACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACACATATCCACGGC 36584 | ||||| |||||| || ||||||||||| |||||||| || ||| ||| | || Sbjct 41706112 ATAAAGAAAACAGCAGTAGCGGCTGCAACAGGAGCTGAATATGCAACAGCAATCGAAGGA 41706053 Query 36585 CTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTA---AGCTGAGATACCA 36641 | |||||| | | | ||||||||||||| | || |||| ||| |||| | |||| Sbjct 41706052 CGCATACCCAAACGAAAACTAAGTTCCCACTCACGCCCCATGTAGCAAGCT---ACACCA 41705996 Query 36642 ATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCACTCGTCGAGG 36701 | | ||||| | ||||| |||| ||| || | |||||||||||||| || || | Sbjct 41705995 AGTAAGAAGTGTAGAACAATTAGTTCATAAGGATCGCCGTTATATAACCATTCATCAATA 41705936 Query 36702 GTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGC 36742 | ||| |||||||| || || || ||||| | ||| || || Sbjct 41705935 GATGCCGCTTCCCAAATAGGATAAAAGTGCAAACCTATAGC 41705895 >seq11 Length=34766867 Score = 338 bits (374), Expect = 2e-88 Identities = 422/577 (73%), Gaps = 6/577 (1%) Strand=Plus/Plus Query 36169 GCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAGCTAGCATACTGGAAGA 36228 |||||||||| | ||||||||||||| || | ||| || || || ||||| ||||||| Sbjct 15042315 GCCAAGCAGCTAAGAAGAAATGTAAAGAACGACAATTGTTGAAACTTGCATATTGGAAGA 15042374 Query 36229 TGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTCTCTTCTTCTTGGCCGA 36288 | | || ||||| || |||||||| || ||||| ||||| || ||||| ||||| || | Sbjct 15042375 TCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAGGTTTCTTCCTCTTGACCAA 15042434 Query 36289 ATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGAATAAGTGAGGAAGTAA 36348 || | || || | || ||||||| | || ||||| | || | | ||||| | Sbjct 15042435 ATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACAAGAAGTTA 15042494 Query 36349 CAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGCA 36408 | | || ||||||||| ||||| | || |||||||| || || ||||| | || Sbjct 15042495 CCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTACACCTAACA 15042554 Query 36409 TATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAG 36468 | || || ||||||||||| ||||| || || |||||||| |||| |||||||||||||| Sbjct 15042555 TGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATAAAATTGAAAG 15042614 Query 36469 TCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTA 36528 | ||| |||| | |||||||||||||| || || || || || |||| ||| |||| | Sbjct 15042615 TACCTAAAATTCTTAGAGGCATACCATCTGAAAAGCTTCCCTGACCAATAGGATAGATCA 15042674 Query 36529 AGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACACATATCCACGGCCTCA 36588 |||| |||||| || ||||||||||| |||||||| || ||| ||| | || | || Sbjct 15042675 AGAAAACAGCAGTAGCGGCTGCAACAGGAGCTGAATATGCAACAGCAATCGAAGGACGCA 15042734 Query 36589 TACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCA---AGTAAGCTGAGATACCAATGA 36645 | || | | | ||||||||||||| | | |||| || ||||| | ||||| | Sbjct 15042735 TGCCCAAACGAAAACTAAGTTCCCACTCACACCCCATGTAGCAAGCT---ACACCAAGTA 15042791 Query 36646 GAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTG 36705 ||||| | ||||| |||| ||| || || ||| |||||||||| || || | | || Sbjct 15042792 AGAAGTGTAGAACAATTAGTTCATAAGGACCACCGCTATATAACCATTCATCAACAGATG 15042851 Query 36706 CAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGC 36742 | |||||||| || || || ||||| | ||| || || Sbjct 15042852 CCGCTTCCCAAATAGGATAAAAGTGCAAACCTATAGC 15042888 >seq2 Length=48577505 Score = 154 bits (170), Expect = 4e-33 Identities = 141/178 (79%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 36362 CATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGCATATGGAACGGATG 36421 ||||||| ||||| | || |||||||| || || ||||| | ||| || || ||||| Sbjct 24951342 CATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTACACCTAACATGTGAAATGGATG 24951401 Query 36422 CATAAGGATATTGTGTTCTGCCTGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACC 36481 |||||| ||||| || | |||||||| |||| ||||||||||||||| ||||||| || Sbjct 24951402 CATAAGAATATTATGCTTAGCCTGAAATACAATCATAAAATTGAAAGTATCTGAAATTCC 24951461 Query 36482 AAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCA 36539 |||||||||||||| || || || || || |||| ||| |||| ||||| |||||| Sbjct 24951462 TAGAGGCATACCATCTGAAAAGCTTCCCTGACCAATAGGATAGATCAAGAAAACAGCA 24951519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150452272104614