Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq19 147 4e-30 seq3 131 3e-25 seq16 122 2e-22 >seq19 Length=50746504 Score = 147 bits (162), Expect = 4e-30 Identities = 265/385 (69%), Gaps = 2/385 (1%) Strand=Plus/Minus Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCG 48369 ||||||| ||| ||||| | || ||||| || ||| || || || || ||||| || Sbjct 32415865 GATCCAGCGAAGGGCCCACTGGGCTTTCTTAGCGACGCAGGGGATGGTGTCGATGGCACG 32415806 Query 48370 GAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACAT 48429 |||||| | || || | | |||| | ||||| ||| || |||||| Sbjct 32415805 GAAGAGGTGGTTCTTCTGGTCGGAGTCCTTGATGTAGGTTTCGAGGAGGAGGCTGTACAT 32415746 Query 48430 CTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC 48489 ||| ||||| | ||||| || ||||||||||| ||||||||||||| |||||| | Sbjct 32415745 CTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCCCGGGCCTCGGGGAG 32415686 Query 48490 CTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAG 48548 ||| | || | | ||| | | || || || ||||| ||| || ||||| || || | Sbjct 32415685 CTGGATCTCCTTTGTGAAGCGC-CCGGCGAGGTTCTCGAGGACGATGCCATCGGAGGCGG 32415627 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGC 48608 | |||||||| ||||| || | | ||| ||||||||| || |||||| | | |||| Sbjct 32415626 CGAAGAAGGCGAGGACGTGGGTGACGAAGTGGCGCTCGCCGTCGGTGAGGGAGTCCCAGT 32415567 Query 48609 CCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTT 48668 | | ||| | | |||||||| || ||| | |||||||| || || ||||| | Sbjct 32415566 GGCGGAGGTCCTGGGAGAGGTCCACCTCCTCCGCCGTCCAGAACGAGGCTTCGGCTTTCT 32415507 Query 48669 TGTACATGCCCCATATGTCCGGATA 48693 ||||||| |||| || | ||| || Sbjct 32415506 TGTACATTTCCCAGATTTGCGGGTA 32415482 >seq3 Length=45779434 Score = 131 bits (144), Expect = 3e-25 Identities = 425/651 (65%), Gaps = 18/651 (3%) Strand=Plus/Minus Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGG 48099 ||||||| |||| |||| ||| || || | |||||||| | | ||||| ||| | Sbjct 40573339 AAACTCCCTCTCAATCTCCACCGCGTCACGCACAATCTCCCTCACGCGCTCCTCACTAAG 40573280 Query 48100 TTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTC 48159 || || | || || | |||| || || ||||| | ||| | || || || Sbjct 40573279 CTTCTTCCTGAGAAGCGAGTACAAGAGA---CACGCGAAGTCGCAGTGAAGCCCCTCATC 40573223 Query 48160 CCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCA 48219 || |||||| ||||||||||| ||| || ||||| | ||| | || |||||||| Sbjct 40573222 TCGCGAGATGAGTTCGTTGGAGAAGGTGAGCCCCGGCATTAACCCACGCTTCTTGAGCCA 40573163 Query 48220 GAAAATTGCCGCGAAAGAG-CCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGA 48278 || || || || |||| || |||||||| || ||||| || ||||| || || Sbjct 40573162 AAATATCGC-GCAAAAGCTTCCGGAGAAGAATATTCCCTCGACGCAAGCGAATGCCACGA 40573104 Query 48279 GCCTCTCTCCGAAAGAAGCGTTCTT-GTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTC 48337 | | ||| |||| || |||| | | ||||||| || ||||| | || || Sbjct 40573103 GGCGCTCCGCGAAGGA----TTCTGAGGCATCGATCCAGCGGAGGGCCCACTGGGCTTTT 40573048 Query 48338 TTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCC 48397 || |||||||||| || || | |||||| || || || || || | ||| Sbjct 40573047 TTGGTGATGCATGGGATGGTGTTTATGGCGCGAAACAGACGATTTTTTTCTGTGGAGTCT 40572988 Query 48398 GCAACATAGGTAGT---GAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCG 48454 | ||||| ||| || | |||||| || ||||| | ||| || || ||| Sbjct 40572987 TTGATGTAGGTTTCTAAGAGGAGGCT---GTACATTTCGGAGTGGATATTTTCGATGGCG 40572931 Query 48455 ATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCC 48514 || ||||| |||||||| || | |||||| | || | |||| ||| ||| | || Sbjct 40572930 ATTTGGAAGCCGTAGAAAGCGCGGGCCTCCGGGAGTTGGATTTCTTTGGTGAAGCGG-CC 40572872 Query 48515 AGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAG 48573 || || || || ||| || || || || || || |||||||| ||||| || | | Sbjct 40572871 GGCGAGGTTTTCTAGGACGATGCCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGTGAT 40572812 Query 48574 GAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCAC 48633 ||| ||||||||| || | |||| | |||| | | ||| | |||||||| Sbjct 40572811 GAAGTGGCGCTCGCCGTCGCTGAGGGTGGCCCAGTGGCGGAGGTCCTGCGAGAGGTCCAC 40572752 Query 48634 TTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 || ||| | ||||||||||| || ||||| || ||||| |||| || Sbjct 40572751 CTCCTCCGCCGTCCAGAAGGAGGCCTCGGCTTTCTTATACATTTCCCAGAT 40572701 >seq16 Length=37887014 Score = 122 bits (134), Expect = 2e-22 Identities = 191/271 (70%), Gaps = 2/271 (1%) Strand=Plus/Plus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 ||||||||| ||||| | ||||| || ||||||||||| ||||||||||| | |||||| Sbjct 5527108 GTACATCTCGGAGTGAATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGGGCCTC 5527167 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTG 48542 | || | ||| | | ||| | | ||||| || |||||| || || || || | Sbjct 5527168 GGGGATTTGGATTTCCTTCGTGAAGCGC-CCAGCGAGGTTCTCAAGTACGATGCCGTCGG 5527226 Query 48543 AAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCAT 48602 | || || |||||||| ||||| || | | ||| ||||||||| || ||| || | | Sbjct 5527227 AGGCGGCGAAGAAGGCGAGGACGTGACTGACGAAGTGGCGCTCGCCGTCGGTCAGGGAGT 5527286 Query 48603 TCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTG 48662 |||| | | ||| | |||||||| || ||| | |||||||| || || | Sbjct 5527287 CCCAGTGGCGGAGGTCCTGCGAGAGGTCCACCTCCTCCGCCGTCCAGAACGAGGCTTCGG 5527346 Query 48663 CTTTTTTGTACATGCCCCATATGTCCGGATA 48693 |||| |||||||| |||| || | ||||| Sbjct 5527347 CTTTCTTGTACATTTCCCAGATTTGAGGATA 5527377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931518931805440