Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 2e-15 seq19 96.9 6e-15 >seq3 Length=45779434 Score = 98.7 bits (108), Expect = 2e-15 Identities = 363/560 (65%), Gaps = 9/560 (2%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||||| ||||| ||||| || | ||| |||||| || || ||| | || || Sbjct 40572701 ATCTGGGAAATGTATAAGAAAGCCGAGGCCTCCTTCTGGACGGCGGAGGAGGTGGACCTC 40572760 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 | ||||| | | |||| | | || | | | ||||| || || ||| || Sbjct 40572761 TCGCAGGACCTCCGCCACTGGGCCACCCTCAGCGACGGCGAGCGCCACTTCATCACCCAC 40572820 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 || | || ||||| || ||||| || || || || || || || || | ||| Sbjct 40572821 GTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCCTAGAAAACCTCGCCGGCCGCTTC 40572880 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAA 25716 |||| ||| | || | ||||||| ||||||||| ||||| || ||||||||| Sbjct 40572881 ACCAAAGAAATCCAACTCCCGGAGGCCCGCGCTTTCTACGGCTTCCAAATCGCCATCGAA 40572940 Query 25717 AATGTGCACTCTGAGGTGTA-TGCCAAGCTTCTGA-TGACGTACATTACAGACGTCGCCG 25774 ||| | ||||| || |||| ||| | ||| | || ||||| | |||| | | | Sbjct 40572941 AATATCCACTCCGAAATGTACAGCC--TCCTCTTAGAAACCTACATCAAAGACTCCACAG 40572998 Query 25775 AGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGT 25834 | | | |||| |||||| | ||||| | ||| || |||||| | || || | || Sbjct 40572999 AAAAAAATCGTCTGTTTCGCGCCATAAACACCATCCCATGCATCACCAAAAAAGCCCAGT 40573058 Query 25835 GGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTG 25894 ||||| | |||||| | ||| | | | || | ||||| || || || || | Sbjct 40573059 GGGCCCTCCGCTGGATCGA-TGCCTCA--GAATCCTTCGCGGAGCGCCTCGTGGCATTCG 40573115 Query 25895 CTGCTGTGGAGGGCATCTTTTTCAGCGG-TTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 || || ||||| || || ||| ||| | ||||| || || || ||||||||| || Sbjct 40573116 CTTGCGTCGAGGGAATATTCTTCTCCGGAAGCTTTTGC-GCGATATTTTGGCTCAAGAAG 40573174 Query 25954 AAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013 ||| ||||| ||||| ||| |||||||| |||||| | || ||||| || Sbjct 40573175 CGTGGGTTAATGCCGGGGCTCACCTTCTCCAACGAACTCATCTCGCGAGATGAGGGGCTT 40573234 Query 26014 CACAGAGATTTTGCCTGCCT 26033 ||| | || || || || || Sbjct 40573235 CACTGCGACTTCGCGTGTCT 40573254 >seq19 Length=50746504 Score = 96.9 bits (106), Expect = 6e-15 Identities = 239/363 (66%), Gaps = 0/363 (0%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||||| ||||||||||| || || ||| |||||| || || ||| | || || Sbjct 32415491 ATCTGGGAAATGTACAAGAAAGCCGAAGCCTCGTTCTGGACGGCGGAGGAGGTGGACCTC 32415550 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 || ||||| | | |||| || | || || | | ||||| || || ||| || Sbjct 32415551 TCCCAGGACCTCCGCCACTGGGACTCCCTCACCGACGGCGAGCGCCACTTCGTCACCCAC 32415610 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 || | || ||||| || ||||| ||||| || || |||||| || || | | ||| Sbjct 32415611 GTCCTCGCCTTCTTCGCCGCCTCCGATGGCATCGTCCTCGAGAACCTCGCCGGGCGCTTC 32415670 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAA 25716 || | ||| | ||| | |||||| | |||||||| |||||||| |||||||| Sbjct 32415671 ACAAAGGAGATCCAGCTCCCCGAGGCCCGGGCCTTCTACGGCTTCCAGATCGCCATCGAG 32415730 Query 25717 AATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCCGAG 25776 || | ||||| ||| |||| | || || || ||||| | ||| || | || Sbjct 32415731 AACATCCACTCCGAGATGTACAGCCTCCTCCTCGAAACCTACATCAAGGACTCCGACCAG 32415790 Query 25777 AGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGG 25836 | | | || || |||||||||| ||| ||| || || | ||| || | |||| Sbjct 32415791 AAGAACCACCTCTTCCGTGCCATCGACACCATCCCCTGCGTCGCTAAGAAAGCCCAGTGG 32415850 Query 25837 GCC 25839 ||| Sbjct 32415851 GCC 32415853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928830971823040