Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq1190 549 5e-152 seq13 426 4e-115 seq14 273 6e-69 seq11 257 5e-64 seq2 136 1e-27 >seq1190 Length=152218 Score = 549 bits (608), Expect = 5e-152 Identities = 719/993 (72%), Gaps = 2/993 (0%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || ||||||||| | || || | || |||||||| |||| |||||| Sbjct 1337 TGGGGTCGCTTCTGTAACTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTT 1278 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTATTGTCGCTTTCAT 42398 ||||| |||||||||| | | | | || || | ||| |||||| ||||||| || Sbjct 1277 GGTGTTTTGATGATTCCTACTTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTTAT 1219 Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458 |||||||||||| ||||| |||||||| |||||||| ||||| ||||| ||||| || || Sbjct 1218 TGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTA 1159 Query 42459 TGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTT 42518 ||| ||||| ||||| ||||||||| | | |||| | || || || | || || Sbjct 1158 TGGAAACAATATCATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATAGGTTTGCACTT 1099 Query 42519 GTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCA 42578 ||| | || |||||||| | |||| |||||| | ||||| ||||| |||||| | Sbjct 1098 TTATCCTATTTGGGAAGCGGCATCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGA 1039 Query 42579 GCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAACT 42638 || | || | |||||| | | ||| | | ||| |||| || || |||||||| Sbjct 1038 ACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGGCGTGAGTGGGAACT 979 Query 42639 TTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGC 42698 | | || | || ||| | || ||||| |||||| || || || ||||| || || Sbjct 978 TAGTTTTCGTTTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGC 919 Query 42699 AGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCC 42758 || ||||| || ||| | ||||||| |||| || || ||||||||||| ||||| Sbjct 918 CGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGATGGTATGCC 859 Query 42759 TCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCT 42818 ||| || ||||| ||||| ||||| || ||| | || || |||||||| ||||| ||||| Sbjct 858 TCTAGGAATTTCAGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCT 799 Query 42819 TATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGC 42878 ||||||||| || || ||| | ||||| || || ||||| || || || | ||| || Sbjct 798 TATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGC 739 Query 42879 TATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCA 42938 |||||||||| | || || ||| | | | | ||||| || ||||| ||| Sbjct 738 TATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGC 679 Query 42939 AAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGG 42998 ||| | || |||| || ||||||||||| || || ||||| ||||| || || ||||| Sbjct 678 TAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGG 619 Query 42999 TTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTTAATAATAGTCGCTCTTTGCACTT 43058 ||| ||||| || | |||||||||||||| || || ||| ||| ||||| || || Sbjct 618 TTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTT 559 Query 43059 CTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTAT 43118 ||| | || |||||||| || || || |||||||| || || | || |||| ||||| Sbjct 558 CTTCTTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTAT 499 Query 43119 GGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATGT 43178 ||| || ||||| |||||||| || || |||||||| | ||||||| ||| || ||| Sbjct 498 GGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGT 439 Query 43179 CATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGA 43238 || ||| |||||||||||| | || || || |||||||| | || || ||||| || Sbjct 438 AATTAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGA 379 Query 43239 GCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271 || ||||| ||||| ||||| || ||||| || Sbjct 378 ACGTAATGCTCATAATTTCCCTCTAGATCTAGC 346 >seq13 Length=45874162 Score = 426 bits (472), Expect = 4e-115 Identities = 633/896 (71%), Gaps = 21/896 (2%) Strand=Plus/Plus Query 42378 CTGT-TTTATTGTCGCTTTCATTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAAC 42436 |||| ||||| || |||| ||||||||||||| ||||| |||||||| |||||||| | Sbjct 7358199 CTGTATTTATCATCACTTTTATTGCTGCCCCTCTAGTAGATATTGATGGTATTCGTGAGC 7358258 Query 42437 CTGTCTCTGGCTCTCTTCTGTATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCA 42496 |||| ||||| ||||| || ||||| ||||| ||||| ||||||||| | | |||| Sbjct 7358259 CTGTTTCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCCATTATTCCTACTT 7358318 Query 42497 GTAACGCAATTGGACTACATTTGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGC 42556 | || || || | || || ||| | || |||||||| | |||| |||||| Sbjct 7358319 CTGCGGCTATAGGTTTGCACTTTTATCCTATTTGGGAAGCGGCATCTGTTGATGAATGGT 7358378 Query 42557 TCTACAATGGCGGACCTTATCAGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTT 42616 | || || ||||| |||||| | || | | | |||||| | | ||| | | | Sbjct 7358379 TATATAACGGCGGTCCTTATGAACTAATTATTCTACACTTCTTACTTGGTGTAGCTTGCT 7358438 Query 42617 ACTTGGGACGCGAATGGGAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTG 42676 || |||| || || ||||||||| | || | || ||| | || || || Sbjct 7358439 ACATGGGGCGTGAGTGGGAACTTAGTTTTCGTTTGGGTATGCGTCCTTGAAT-------- 7358490 Query 42677 CTTACTCTGCCCCTGTGGCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAG 42736 ||| ||| || || || ||||| || ||| | ||||||| |||| || | Sbjct 7358491 -------TGC---TGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAGG 7358540 Query 42737 GTTCTTTTTCAGATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCT 42796 | ||||||||||| |||||||| || ||||| ||||| | ||| || ||| | || | Sbjct 7358541 GAAGCTTTTCAGATGGTATGCCTCTAGGAATTTCAGGTACTTCCAATTTTATGATTGTAT 7358600 Query 42797 TCCAGGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTAT 42856 | |||||| | ||||| |||||||||||||| || || ||| | | ||| || || |||| Sbjct 7358601 TTCAGGCTAAGCATAATATTCTTATGCATCCATTTCACATGTTGGTTGTAGCTGGTGTAT 7358660 Query 42857 TTGGTGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGC-GT 42915 | || || || || || |||||||||| | |||| | || || ||| | | Sbjct 7358661 TCGGCGGCTCCTTATTTAGTGCTATGCATGATTC-CTTGGTAACTTTTAGTTTGATCAGG 7358719 Query 42916 GAAACGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACT 42975 ||||| || ||||| ||| ||| | || |||| || |||||||||||||| || Sbjct 7358720 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAGGAAACC 7358779 Query 42976 TATAACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT 43035 ||||| ||||| | || |||||||| ||||| || | |||||||||||||| || Sbjct 7358780 TATAATATTGTAGTTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTC 7358839 Query 43036 AATAATAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTC 43095 || ||| ||| ||||| || ||||| |||| |||||||| | || || |||||||| Sbjct 7358840 AACAATTCTCGTTCTTTACATTTCTTCTTTGCTGCTTGGCCTATAGTAGGTATTTGGTTT 7358899 Query 43096 ACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCA 43155 || || | || ||| |||||||| || ||||| |||||||| || || |||||||| Sbjct 7358900 ACCGCTTTAGGTATCAACACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCC 7358959 Query 43156 CTTGTTGATAATCAGAATCATGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAAC 43215 | ||||||| ||| || ||| || ||| |||||||||||| | || || || ||| Sbjct 7358960 GTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGAGCTAAC 7359019 Query 43216 CTTGGCTTTGAGGTGATGCACGAGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271 ||||| | || || ||||| || || ||||| ||||| ||||| || ||||| || Sbjct 7359020 CTTGGTATGGAAGTAATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGC 7359075 >seq14 Length=49042192 Score = 273 bits (302), Expect = 6e-69 Identities = 402/569 (71%), Gaps = 0/569 (0%) Strand=Plus/Plus Query 42514 CATTTGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCT 42573 || || ||| | || |||||||| | |||| |||||| | || || |||| ||| Sbjct 41705907 CACTTTTATCCTATTTGGGAAGCGGCATCTATTGATGAATGGTTATATAACGGCGATCCT 41705966 Query 42574 TATCAGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGG 42633 ||| | || | || | |||||| | | ||| | | ||| |||| || || ||| Sbjct 41705967 TATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGGCGTGAGTGG 41706026 Query 42634 GAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTG 42693 |||||| | || | || ||| | || | ||| |||||| || || || ||||| Sbjct 41706027 GAACTTAGTTTTCGTTTGGGTATGCGTCCTTCGATTGCTGTTGCATATTCAGCTCCTGTT 41706086 Query 42694 GCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGA 42753 || || || ||||| || ||| || ||||||| |||| || || ||||||||||| Sbjct 41706087 GCAGCCGCTACTGCTGTTTTCTTTATCTATCCTATTGGTCAGGGAAGCTTTTCAGATGGT 41706146 Query 42754 ATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAAC 42813 |||||||| || |||| ||||| ||||| || ||| | || || |||||||| ||||| Sbjct 41706147 ATGCCTCTAGGAATTTTAGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAAT 41706206 Query 42814 ATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTC 42873 |||||||||||||| || || ||| | ||||| || || ||||| || || || | ||| Sbjct 41706207 ATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTC 41706266 Query 42874 TCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAA 42933 | |||||||||| | || || |||| | | | | ||||| || ||||| ||| Sbjct 41706267 AGTGATATGCATGGTTCCTTGGTAACTTCTTGTTTGATCAGGGAAACCACAGAAAATGAA 41706326 Query 42934 AGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCG 42993 ||| | || |||| || ||||||||||| || || ||||| ||||| || || Sbjct 41706327 TCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCT 41706386 Query 42994 CATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTTAATAATAGTCGCTCTTTG 43053 |||||||| ||||| || | |||||||||||||| || || ||| |||| ||||| Sbjct 41706387 CATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTGTCGTTCTTTA 41706446 Query 43054 CACTTCTTTCTTGCCGCTTGGCCCGTTGT 43082 || ||||| | || |||||||| || || Sbjct 41706447 CATTTCTTCTTAGCTGCTTGGCCAGTAGT 41706475 >seq11 Length=34766867 Score = 257 bits (284), Expect = 5e-64 Identities = 394/562 (70%), Gaps = 0/562 (0%) Strand=Plus/Minus Query 42514 CATTTGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCT 42573 || || ||| | || |||||||| | |||| |||||| | || | || || ||| Sbjct 15042876 CACTTTTATCCTATTTGGGAAGCGGCATCTGTTGATGAATGGTTATATAGCGGTGGTCCT 15042817 Query 42574 TATCAGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGG 42633 ||| | || | || | |||||| | | ||| | | ||| |||| | || ||| Sbjct 15042816 TATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGGTGTGAGTGG 15042757 Query 42634 GAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTG 42693 |||||| | || | || ||| | || | ||| |||||| || || || ||||| Sbjct 15042756 GAACTTAGTTTTCGTTTGGGCATGCGTCCTTCGATTGCTGTTGCATATTCAGCTCCTGTT 15042697 Query 42694 GCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGA 42753 || || || ||||| || ||| | ||||||| |||| || || ||||||||||| Sbjct 15042696 GCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGATGGT 15042637 Query 42754 ATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAAC 42813 |||||||| | |||| ||||| ||||| || ||| | || || |||||||| ||||| Sbjct 15042636 ATGCCTCTAAGAATTTTAGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAAT 15042577 Query 42814 ATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTC 42873 |||||||||||||| || || ||| | ||||| || || ||||| || || || | ||| Sbjct 15042576 ATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTC 15042517 Query 42874 TCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAA 42933 |||||||||||| | || || |||| | | | | ||||| || ||||| ||| Sbjct 15042516 AGTGCTATGCATGGTTCCTTGGTAACTTCTTGTTTGATCAGGGAAACCACAGAAAATGAA 15042457 Query 42934 AGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCG 42993 ||| | || |||| || ||||||||||| || || ||||| ||||| || || Sbjct 15042456 TCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCT 15042397 Query 42994 CATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTTAATAATAGTCGCTCTTTG 43053 |||||||| ||||| || | |||||||||||||| || || ||| |||| ||||| Sbjct 15042396 CATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTGTCGTTCTTTA 15042337 Query 43054 CACTTCTTTCTTGCCGCTTGGC 43075 || ||||| | || ||||||| Sbjct 15042336 CATTTCTTCTTAGCTGCTTGGC 15042315 >seq2 Length=48577505 Score = 136 bits (150), Expect = 1e-27 Identities = 196/274 (72%), Gaps = 2/274 (1%) Strand=Plus/Minus Query 42694 GCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGA 42753 ||| | || ||||| || ||| | ||||||| |||| || || ||||||||||| Sbjct 24951530 GCTCCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGATGGT 24951471 Query 42754 ATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAAC 42813 |||||||| || ||||| | ||| ||||| || ||| | || || |||||| | ||||| Sbjct 24951470 ATGCCTCTAGGAATTTCAGATACTTTCAATTTTATGATTGTATTTCAGGCTAAGCATAAT 24951411 Query 42814 ATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTC 42873 |||||||||||||| || || ||| | ||||| || || ||||| || || || | ||| Sbjct 24951410 ATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTC 24951351 Query 42874 TCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTG-TGCGTGAAACGACTGAAAACGA 42932 |||||| ||||| |||| | || || ||| | | ||||| || ||||| || Sbjct 24951350 AGTGCTATGTATGGT-TCCTTGGTAACTTTTAGTTTGATCAGGGAAACCACAGAAAATGA 24951292 Query 42933 AAGCCAAAATTATGGCTACAAGTTCGGTCAAGAG 42966 | ||| | || |||| || ||||||||| Sbjct 24951291 ATCTGCTAATGAAGGTTACAGATTTGGTCAAGAG 24951258 Score = 84.2 bits (92), Expect = 6e-12 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 42398 TTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGT 42457 |||||||||||| ||||| ||||||| |||||||| ||||| ||| | ||||| | | Sbjct 30680513 TTGCTGCCCCTCTAGTAGATATTGATGCTATTCGTGAGCCTGTTTCTCGATCTCTATTTT 30680454 Query 42458 ATGGCAACAACATCATCTCTGGTGCC 42483 |||| ||||| |||| ||||||||| Sbjct 30680453 ATGGAAACAATGTCATTTCTGGTGCC 30680428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143530769997668