Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq1190 526 3e-144 seq13 421 8e-113 seq14 307 1e-78 seq11 304 2e-77 >seq1190 Length=152218 Score = 526 bits (582), Expect = 3e-144 Identities = 655/896 (73%), Gaps = 6/896 (1%) Strand=Plus/Minus Query 155062 TTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTC 155121 || ||| |||| || |||||||| ||||| ||||| ||||||||||||||||| || || Sbjct 1235 TTTATTATCGCTTTTATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTT 1176 Query 155122 GCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAAC 155181 |||| ||| || | ||||| ||||| ||||| |||||||| || | |||| ||| Sbjct 1175 TCTGGATCTCTACTTTATGGAAACAATATCATTTCTGGTGCCATTATTCCTACTTCTGCG 1116 Query 155182 GCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTAC 155241 || || ||| | ||||| ||||||||||||||||| ||| || ||||||| ||||| ||| Sbjct 1115 GCTATAGGTTTGCACTTTTATCCTATTTGGGAAGCGGCATCTGTTGATGAATGGTTATAC 1056 Query 155242 AATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGT 155301 || || ||||||| |||| | || | |||||| | | || | | ||| Sbjct 1055 AACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATG 996 Query 155302 GGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATAC 155361 || ||| ||||||||||| || ||| | || |||||||||||||| ||||||||| Sbjct 995 GGGCGTGAGTGGGAACTTAGTTTTCGTTTGGGTATGCGTCCTTGGATTGCTGTTGCATAT 936 Query 155362 TCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCT 155421 || || || || | || || ||||| ||| | | |||||| | ||||| || Sbjct 935 TCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGC 876 Query 155422 TTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAA 155481 || || |||| |||||||| || || || |||||||| || | |||| | || || || Sbjct 875 TTTTCAGATGGTATGCCTCTAGGAATTTCAGGTACTTTCAATTTTATGATTGTATTTCAG 816 Query 155482 GCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGT 155541 || || || ||||| |||||||| || || |||||| | || ||||| ||||| ||||| Sbjct 815 GCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGC 756 Query 155542 GGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACT 155601 || || || ||| ||||||||| ||||| ||||| || ||| | ||| | ||||| Sbjct 755 GGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACC 696 Query 155602 ACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAAC 155661 || || | || ||| || | ||||||| || || ||||| |||||||| ||||| Sbjct 695 ACAGAAAATGAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAAT 636 Query 155662 ATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAACAAC 155721 ||||| ||||||||||| || || || || | |||||||| |||||| |||||||| Sbjct 635 ATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAAT 576 Query 155722 TCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCT 155781 || | | | || |||||| | ||||| |||||||| || | || ||| || ||| Sbjct 575 TCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCT 516 Query 155782 ATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTA 155841 | ||| | || ||||| |||||| | || |||||||| |||||||| || ||||| Sbjct 515 TTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCCGTAGTT 456 Query 155842 GACGCTAGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTT 155898 || |||| ||| || || ||| ||||| || ||| ||||||| ||| ||| Sbjct 455 GA---TAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGAGCTAACCTT 399 Query 155899 GGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGC 155954 ||||||||||||||||| || ||||| ||||| || |||||||| || || ||||| Sbjct 398 GGTATGGAAGTAATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCTGC 343 >seq13 Length=45874162 Score = 421 bits (466), Expect = 8e-113 Identities = 622/884 (70%), Gaps = 24/884 (3%) Strand=Plus/Plus Query 155074 TTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTA 155133 || |||||||| |||| ||||| ||||||||||||||||| || || |||| ||| || Sbjct 7358216 TTTATTGCTGCCCCTCTAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTA 7358275 Query 155134 ATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTC 155193 | ||||| ||||| ||||| |||||||| || | |||| ||| || || ||| | Sbjct 7358276 CTTTATGGAAACAATATCATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATAGGTTTG 7358335 Query 155194 CACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCT 155253 ||||| ||||||||||||||||| ||| || ||||||| ||||| || || || |||||| Sbjct 7358336 CACTTTTATCCTATTTGGGAAGCGGCATCTGTTGATGAATGGTTATATAACGGCGGTCCT 7358395 Query 155254 TTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGG 155313 | |||| | | | |||||| | | || | | ||| || ||| ||||| Sbjct 7358396 TATGAACTAATTATTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGGCGTGAGTGG 7358455 Query 155314 GAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTA 155373 |||||| || ||| | || ||||||||||| || ||||||| | || | Sbjct 7358456 GAACTTAGTTTTCGTTTGGGTATGCGTCCTTGAATTGCTGTTGCAGCCGCTACT------ 7358509 Query 155374 TCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCG 155433 ||||| ||| | | |||||| | ||||| || || || |||| Sbjct 7358510 ------------GCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGATGGT 7358557 Query 155434 ATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAAT 155493 |||||||| || || || ||||||| || | |||| | || || || || | || ||| Sbjct 7358558 ATGCCTCTAGGAATTTCAGGTACTTCCAATTTTATGATTGTATTTCAGGCTAAGCATAAT 7358617 Query 155494 ATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTC 155553 || |||||||| || || |||||| | | ||||| ||||| ||||| || || | || Sbjct 7358618 ATTCTTATGCATCCATTTCACATGTTGGTTGTAGCTGGTGTATTCGGCGGCTCCTTATTT 7358677 Query 155554 TCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAG 155613 ||||||||| | ||| ||||| || | | | ||| | ||||| || || | || Sbjct 7358678 AGTGCTATGCATGATTCCTTGGTAACTTTTAGTTTGATCAGGGAAACCACAGAAAATGAA 7358737 Query 155614 TCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCT 155673 ||| || | ||||||| || || ||||| || ||||| ||||| ||||| | |||| Sbjct 7358738 TCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAGGAAACCTATAATATTGTAGTTGCT 7358797 Query 155674 CATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTT 155733 ||||| || || || || | |||||||| |||||| |||||||| || | | | Sbjct 7358798 CATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTA 7358857 Query 155734 CACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCA 155793 || |||||| ||||||| |||||| | || | || ||| || ||| | ||| | Sbjct 7358858 CATTTCTTCTTTGCTGCTTGGCCTATAGTAGGTATTTGGTTTACCGCTTTAGGTATCAAC 7358917 Query 155794 ACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGT--- 155850 || ||||| |||||| | || |||||||| |||||||| || ||||| || |||| Sbjct 7358918 ACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGA---TAGTCAA 7358974 Query 155851 GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTA 155910 ||| || || ||| ||||| || ||| ||||||| ||| ||||||||||||||| Sbjct 7358975 GGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTA 7359034 Query 155911 ATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGC 155954 ||||| || ||||| ||||| || |||||||| || || ||||| Sbjct 7359035 ATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCTGC 7359078 >seq14 Length=49042192 Score = 307 bits (340), Expect = 1e-78 Identities = 433/608 (71%), Gaps = 0/608 (0%) Strand=Plus/Plus Query 155155 TCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAA 155214 |||||||| || | |||| ||| || || ||| | ||||| ||||||||||||||| Sbjct 41705868 TCTGGTGCCATTATTCCTACTTCTGCGGCTATAGGTTTGCACTTTTATCCTATTTGGGAA 41705927 Query 155215 GCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCAC 155274 || ||| || ||||||| ||||| || || || | ||||| |||| | || | ||| Sbjct 41705928 GCGGCATCTATTGATGAATGGTTATATAACGGCGATCCTTATGAACTAATTGTTCTACAC 41705987 Query 155275 TTCCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGC 155334 ||| | | || | | ||| || ||| ||||||||||| || ||| | || Sbjct 41705988 TTCTTACTTGGTGTAGCTTGCTACATGGGGCGTGAGTGGGAACTTAGTTTTCGTTTGGGT 41706047 Query 155335 ATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTC 155394 |||||||||| ||| ||||||||| || || || || | || || ||||| ||| Sbjct 41706048 ATGCGTCCTTCGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTC 41706107 Query 155395 CTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGT 155454 || | |||||| | ||||| || || || |||| |||||||| || || | ||| Sbjct 41706108 TTTATCTATCCTATTGGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGGAATTTTAGGT 41706167 Query 155455 ACTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCAC 155514 ||||| || | |||| | || || || || || || ||||| |||||||| || || ||| Sbjct 41706168 ACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCAC 41706227 Query 155515 ATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTG 155574 ||| | || ||||| ||||| ||||| || || || ||| || |||||| ||||| ||| Sbjct 41706228 ATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGATATGCATGGTTCCTTG 41706287 Query 155575 GTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAG 155634 || || |||| | ||| | ||||| || || | || ||| || | ||||||| Sbjct 41706288 GTAACTTCTTGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGA 41706347 Query 155635 TTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTT 155694 || || ||||| |||||||| ||||| ||||| ||||||||||| || || || || | Sbjct 41706348 TTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTG 41706407 Query 155695 ATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGG 155754 |||||||| |||||| |||||||| | | | | || |||||| | ||||| ||| Sbjct 41706408 ATCTTCCAATATGCAAGTTTCAACAATTGTCGTTCTTTACATTTCTTCTTAGCTGCTTGG 41706467 Query 155755 CCTGTGGT 155762 || || || Sbjct 41706468 CCAGTAGT 41706475 >seq11 Length=34766867 Score = 304 bits (336), Expect = 2e-77 Identities = 418/582 (72%), Gaps = 2/582 (0%) Strand=Plus/Minus Query 155182 GCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTAC 155241 || || ||| | ||||| ||||||||||||||||| ||| || ||||||| ||||| || Sbjct 15042888 GCTATAGGTTTGCACTTTTATCCTATTTGGGAAGCGGCATCTGTTGATGAATGGTTATAT 15042829 Query 155242 AATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATAC-TG 155300 | |||||||||| |||| | || | |||||| | | || | | ||| || Sbjct 15042828 AGCGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATG 15042769 Query 155301 TGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATA 155360 ||| || ||||||||||| || ||| | ||||||||||||| ||| ||||||||| Sbjct 15042768 GGGT-GTGAGTGGGAACTTAGTTTTCGTTTGGGCATGCGTCCTTCGATTGCTGTTGCATA 15042710 Query 155361 CTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTC 155420 || || || || | || || ||||| ||| | | |||||| | ||||| || Sbjct 15042709 TTCAGCTCCTGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAG 15042650 Query 155421 TTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCA 155480 || || |||| |||||||| | || | |||||||| || | |||| | || || || Sbjct 15042649 CTTTTCAGATGGTATGCCTCTAAGAATTTTAGGTACTTTCAATTTTATGATTGTATTTCA 15042590 Query 155481 AGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGG 155540 || || || ||||| |||||||| || || |||||| | || ||||| ||||| ||||| Sbjct 15042589 GGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGG 15042530 Query 155541 TGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAAC 155600 || || || ||| ||||||||| ||||| ||||| || |||| | ||| | ||||| Sbjct 15042529 CGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTTGTTTGATCAGGGAAAC 15042470 Query 155601 TACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAA 155660 || || | || ||| || | ||||||| || || ||||| |||||||| ||||| Sbjct 15042469 CACAGAAAATGAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAA 15042410 Query 155661 CATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAACAA 155720 ||||| ||||||||||| || || || || | |||||||| |||||| |||||||| Sbjct 15042409 TATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAA 15042350 Query 155721 CTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGT 155762 | | | | || |||||| | ||||| |||| ||| || Sbjct 15042349 TTGTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCTTGTAGT 15042308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584826493265960