Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq1190 531 6e-146 seq13 430 1e-115 seq14 315 8e-81 seq11 307 1e-78 seq2 140 4e-28 >seq1190 Length=152218 Score = 531 bits (588), Expect = 6e-146 Identities = 710/986 (72%), Gaps = 6/986 (1%) Strand=Plus/Plus Query 67359 GCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGT 67418 ||||| || || |||||||| || ||||| ||||| || ||||| |||||||| ||||| Sbjct 343 GCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATTACTTCCATACCAAGG 402 Query 67419 CCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCG---TCAACG 67475 |||| ||||| || || ||||| ||| ||| || || |||| ||||| Sbjct 403 TTAGCTCGGTTAATAATATCAGCCCAGGTATTAATTAC---ACGACCTTGACTATCAACT 459 Query 67476 ACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCA 67535 |||||||||||||| |||||||| || | |||||| |||||||| | ||| | || Sbjct 460 ACGGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCG 519 Query 67536 GTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTG 67595 || ||||| || | || ||||| | ||||| | |||||| || | | | || ||| Sbjct 520 GTAAACCAAATACCTACTACAGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAATTG 579 Query 67596 TTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTG 67655 |||||| |||||| ||||||||||| || || || || ||||||||||| ||||| || Sbjct 580 TTGAAACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTA 639 Query 67656 TAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTT 67715 || || ||||| ||||| || || ||||||| | || || || | || || ||| Sbjct 640 TAGGTTTCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTT 699 Query 67716 TCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCG 67775 || ||||| | | |||||| || | ||||| ||||||||||| || || || || ||| Sbjct 700 TCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCG 759 Query 67776 AATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGG 67835 |||||||| ||||| || | ||| || ||||| |||||||| || || ||||| || || Sbjct 760 AATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGA 819 Query 67836 AACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAA 67895 || || | ||| | || |||||||| ||||| || |||||||| | || || || Sbjct 820 AATACAATCATAAAATTGAAAGTACCTGAAATTCCTAGAGGCATACCATCTGAAAAGCTT 879 Query 67896 CCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTAT 67955 || ||||| | |||||||| |||||| ||||| || || | || ||||| || ||| Sbjct 880 CCCTGACCAATAGGATAGATCAAGAAAACAGCAGTAGCGGCTGCAACAGGAGCTGAATAT 939 Query 67956 GCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCACAG 68015 || ||| ||||||||||||||||| | ||| || ||||||||||| ||| || | Sbjct 940 GCAACAGCAATCCAAGGACGCATACCCAAACGAAAACTAAGTTCCCACTCACGCCCCATG 999 Query 68016 TATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTATAC 68075 || | | || | | |||||| | || | |||| |||| || || || || Sbjct 1000 TAGCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTAT 1059 Query 68076 AACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTTT 68135 ||||| ||||| | || ||| |||||||| |||||||| ||||| | ||| || || Sbjct 1060 AACCATTCATCAACAGATGCCGCTTCCCAAATAGGATAAAAGTGCAAACCTATAGCCGCA 1119 Query 68136 GAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAACA 68195 ||| |||||| || |||||||||||||| ||||| || || | || || || | |||| Sbjct 1120 GAAGTAGGAATAATGGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAAACA 1179 Query 68196 GGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAAGCAA 68255 || || | |||||||| ||||| |||||||| || ||||| || || || || || | Sbjct 1180 GGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATAAAAGCGATAATAAATACA 1239 Query 68256 GTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCAACATAGATGCGA 68315 | | ||| | | || |||||||||||| ||||| ||||| |||| || | ||| Sbjct 1240 GAAGTTGCGGTCAATAAAGTAGGAATCATCAAAACACCAAACCATCCAATGTAAAGACGA 1299 Query 68316 TTGTCAACTGAGGTGACCCAGTTACA 68341 || || ||| | ||||||||| Sbjct 1300 TTTTCGGTGCTGGTTATCCAGTTACA 1325 >seq13 Length=45874162 Score = 430 bits (476), Expect = 1e-115 Identities = 631/896 (70%), Gaps = 24/896 (3%) Strand=Plus/Minus Query 67359 GCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGT 67418 ||||| || || |||||||| || ||||| ||||| || ||||| |||||||| ||||| Sbjct 7359078 GCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATTACTTCCATACCAAGG 7359019 Query 67419 CCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCG---TCAACG 67475 |||| ||||| || || ||||| ||| ||| || || |||| ||||| Sbjct 7359018 TTAGCTCGGTTAATAATATCAGCCCAGGTATTAATTAC---ACGACCTTGACTATCAACT 7358962 Query 67476 ACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCA 67535 |||||||||||||| |||||||| || | |||||| |||||||| | ||| | || Sbjct 7358961 ACGGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGTTGATACCTAAAGCG 7358902 Query 67536 GTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTG 67595 || ||||| || | || | ||| | ||||||| |||||| || | | | || ||| Sbjct 7358901 GTAAACCAAATACCTACTATAGGCCAAGCAGCAAAGAAGAAATGTAAAGAACGAGAATTG 7358842 Query 67596 TTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTG 67655 |||||| |||||| ||||||||||| || || || || ||||||||| | ||||| || Sbjct 7358841 TTGAAACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAACTACAATATTA 7358782 Query 67656 TAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTT 67715 || || || || ||||| || || ||||||| | || || || | || || ||| Sbjct 7358781 TAGGTTTCCTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTT 7358722 Query 67716 TCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCG 67775 || ||||| | | | |||| || | ||| | |||||||||||||| | || || ||| Sbjct 7358721 TCCCTGATCAAACTAAAAGTTACCAAGGAATCATGCATAGCACTAAATAAGGAGCCGCCG 7358662 Query 67776 AATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGG 67835 |||||||| ||||| | | ||| || ||||| |||||||| || || |||| || || Sbjct 7358661 AATACACCAGCTACAACCAACATGTGAAATGGATGCATAAGAATATTATGCTTAGCCTGA 7358602 Query 67836 AACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAA 67895 || || | ||| | || ||||||| ||||| || |||||||| | || || || Sbjct 7358601 AATACAATCATAAAATTGGAAGTACCTGAAATTCCTAGAGGCATACCATCTGAAAAGCTT 7358542 Query 67896 CCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTAT 67955 || ||||| | |||||||| |||||| ||||| || || | | Sbjct 7358541 CCCTGACCAATAGGATAGATCAAGAAAACAGC------------------AGTAGCGGCT 7358500 Query 67956 GCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCACAG 68015 || ||| || |||||||||||||| | ||| || ||||||||||| ||| || | Sbjct 7358499 GCAACAGCAATTCAAGGACGCATACCCAAACGAAAACTAAGTTCCCACTCACGCCCCATG 7358440 Query 68016 TATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTATAC 68075 || | | || | | |||||| | | | |||| |||| || || ||||| Sbjct 7358439 TAGCAAGCTACACCAAGTAAGAAGTGTAGAATAATTAGTTCATAAGGACCGCCGTTATAT 7358380 Query 68076 AACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTTT 68135 ||||| ||||| | || ||| |||||||| |||||||| ||||| | ||| || || Sbjct 7358379 AACCATTCATCAACAGATGCCGCTTCCCAAATAGGATAAAAGTGCAAACCTATAGCCGCA 7358320 Query 68136 GAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAACA 68195 ||| |||||| || |||||||||||||| ||||| || || | || || || | |||| Sbjct 7358319 GAAGTAGGAATAATGGCACCAGAAATGATATTGTTTCCATAAAGTAGAGATCCAGAAACA 7358260 Query 68196 GGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAA 68251 || || | |||||||| ||||| ||| |||| || ||||| || | ||||| || Sbjct 7358259 GGCTCACGAATACCATCAATATCTACTAGAGGGGCAGCAATAAAAGTGATGATAAA 7358204 >seq14 Length=49042192 Score = 315 bits (348), Expect = 8e-81 Identities = 410/567 (72%), Gaps = 0/567 (0%) Strand=Plus/Minus Query 67593 TTGTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATG 67652 ||||||||| |||||| ||||||||||| || || || || ||||||||||| ||||| Sbjct 41706433 TTGTTGAAACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATA 41706374 Query 67653 TTGTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTA 67712 || || || ||||| ||||| || || ||||||| | || || || | || || Sbjct 41706373 TTATAGGTTTCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 41706314 Query 67713 GTTTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCA 67772 ||||| ||||| | | ||||||| || | ||||| |||||| |||| || || || || Sbjct 41706313 GTTTCCCTGATCAAACAAGAAGTTACCAAGGAACCATGCATATCACTGAATAGGGAGCCG 41706254 Query 67773 CCGAATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCT 67832 ||||||||||| ||||| || | ||| || ||||| |||||||| || || ||||| || Sbjct 41706253 CCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCC 41706194 Query 67833 TGGAACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAA 67892 || || || | ||| | || |||||||| |||| || |||||||| | || || || Sbjct 41706193 TGAAATACAATCATAAAATTGAAAGTACCTAAAATTCCTAGAGGCATACCATCTGAAAAG 41706134 Query 67893 GAACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAG 67952 || ||||| | |||||||| ||||| ||||| || || | || ||||| || Sbjct 41706133 CTTCCCTGACCAATAGGATAGATAAAGAAAACAGCAGTAGCGGCTGCAACAGGAGCTGAA 41706074 Query 67953 TATGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCA 68012 ||||| ||| ||| ||||||||||||| | ||| || ||||||||||| ||| || Sbjct 41706073 TATGCAACAGCAATCGAAGGACGCATACCCAAACGAAAACTAAGTTCCCACTCACGCCCC 41706014 Query 68013 CAGTATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTA 68072 ||| | | || | | |||||| | || | |||| |||| | || ||| Sbjct 41706013 ATGTAGCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGATCGCCGTTA 41705954 Query 68073 TACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCG 68132 || ||||| ||||| | || ||| |||||||| |||||||| ||||| | ||| || || Sbjct 41705953 TATAACCATTCATCAATAGATGCCGCTTCCCAAATAGGATAAAAGTGCAAACCTATAGCC 41705894 Query 68133 TTTGAACTAGGAACAACAGCACCAGAA 68159 ||| |||||| || ||||||||| Sbjct 41705893 GCAGAAGTAGGAATAATGGCACCAGAA 41705867 >seq11 Length=34766867 Score = 307 bits (340), Expect = 1e-78 Identities = 402/554 (73%), Gaps = 2/554 (0%) Strand=Plus/Plus Query 67593 TTGTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATG 67652 ||||||||| |||||| ||||||||||| || || || || ||||||||||| ||||| Sbjct 15042350 TTGTTGAAACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATA 15042409 Query 67653 TTGTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTA 67712 || || || ||||| ||||| || || ||||||| | || || || | || || Sbjct 15042410 TTATAGGTTTCTTCCTCTTGACCAAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 15042469 Query 67713 GTTTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCA 67772 ||||| ||||| | | ||||||| || | ||||| ||||||||||| || || || || Sbjct 15042470 GTTTCCCTGATCAAACAAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCG 15042529 Query 67773 CCGAATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCT 67832 ||||||||||| ||||| || | ||| || ||||| |||||||| || || ||||| || Sbjct 15042530 CCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCC 15042589 Query 67833 TGGAACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAA 67892 || || || | ||| | || |||||||| |||| | |||||||| | || || || Sbjct 15042590 TGAAATACAATCATAAAATTGAAAGTACCTAAAATTCTTAGAGGCATACCATCTGAAAAG 15042649 Query 67893 GAACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAG 67952 || ||||| | |||||||| |||||| ||||| || || | || ||||| || Sbjct 15042650 CTTCCCTGACCAATAGGATAGATCAAGAAAACAGCAGTAGCGGCTGCAACAGGAGCTGAA 15042709 Query 67953 TATGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCA 68012 ||||| ||| ||| |||||||||| || | ||| || ||||||||||| || ||| Sbjct 15042710 TATGCAACAGCAATCGAAGGACGCATGCCCAAACGAAAACTAAGTTCCCACTCAC-ACCC 15042768 Query 68013 CA-GTATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATT 68071 || ||| | | || | | |||||| | || | |||| |||| ||||| | Sbjct 15042769 CATGTAGCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGCT 15042828 Query 68072 ATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGC 68131 ||| ||||| ||||| | || ||| |||||||| |||||||| ||||| | ||| || || Sbjct 15042829 ATATAACCATTCATCAACAGATGCCGCTTCCCAAATAGGATAAAAGTGCAAACCTATAGC 15042888 Query 68132 GTTTGAACTAGGAA 68145 ||| |||||| Sbjct 15042889 CGCAGAAGTAGGAA 15042902 >seq2 Length=48577505 Score = 140 bits (154), Expect = 4e-28 Identities = 187/260 (72%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 67668 TCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTTCTCTGATAAGA 67727 ||||| || || ||||||| | || || || | || || ||||| ||||| | | Sbjct 24951259 TCTTGACCAAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAA 24951318 Query 67728 GAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCGAATACACCTGCT 67787 | |||| || | ||||| | ||||||||| || || || || ||||||||||| ||| Sbjct 24951319 CTAAAAGTTACCAAGGAACCATACATAGCACTGAATAGGGAGCCGCCGAATACACCAGCT 24951378 Query 67788 ACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAACACGAACATG 67847 || || | ||| || ||||| |||||||| || || |||| || || || || | ||| Sbjct 24951379 ACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTTAGCCTGAAATACAATCATA 24951438 Query 67848 TAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAACCTTGACCGAAA 67907 | || |||||| | ||||| || |||||||| | || || || || ||||| | | Sbjct 24951439 AAATTGAAAGTATCTGAAATTCCTAGAGGCATACCATCTGAAAAGCTTCCCTGACCAATA 24951498 Query 67908 GGATAGACCAAGAACACAGC 67927 ||||||| |||||| ||||| Sbjct 24951499 GGATAGATCAAGAAAACAGC 24951518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566938759573560