Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq10 118 2e-21 seq13 105 1e-17 seq19 91.5 3e-13 >seq10 Length=51566898 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| |||| ||||| || | ||||| ||||| || |||| | ||||| Sbjct 4577030 CGAAGCACCAAATGCAGAGTCGATTCTTTCTGGATATTGTAATCGGCGAGGGTTCTGCCG 4577089 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | |||||||||||| || || || | || ||||| ||||| || ||||| ||| Sbjct 4577090 TCTTCGAGTTGTTTTCCGGCGAAGATCAAACGTTGCTGATCCGGAGGAATCCCTTCCTTA 4577149 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || |||| ||| | || || || ||||| ||||| || ||||| || || Sbjct 4577150 TCTTGAATCTTGGCTTTCACGTTATCGATTGTGTCGGAGGACTCCACCTCTAGCGTGATT 4577209 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || ||||| || || |||||||| Sbjct 4577210 GTTTTGCCAGTAAGGGTTTTGACGAAGATTTGCAT 4577244 Score = 89.7 bits (98), Expect = 9e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || || ||||||| | ||||| || || | ||||||||||| || ||||| | | Sbjct 4577291 ATGTTGTAGTCGGCGAGGGTTCTGCCGTCTTCGAGCTGTTTTCCGGCGAAGATTAAACGC 4577350 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 |||||||| ||||| || || || || ||||| ||||||| || | || || || Sbjct 4577351 TGTTGATCCGGAGGAATGCCCTCCTTGTCTTGGATTTTGGCCTTCACGTTGTCGATGGTG 4577410 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || || ||||| || || | || || || || || ||||| ||||| || || || ||| Sbjct 4577411 TCAGAGGACTCCACCTCCAAGGTGATCGTCTTGCCAGTTAGGGTTTTCACGAAGATCTGC 4577470 Query 193359 AT 193360 || Sbjct 4577471 AT 4577472 >seq13 Length=45874162 Score = 105 bits (116), Expect = 1e-17 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 193145 TCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGA 193204 |||||| |||||||| | || | ||||| |||||| || |||| | ||||| Sbjct 25114697 TCGAAGCACCAGATGAAGCGTCGATTCTTTCTGAATATTGTAATCGGCGAGGGTTCTGCC 25114756 Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 || || | ||||||||||| || || || | ||| || || || || || ||||| || Sbjct 25114757 GTCTTCGAGCTGTTTTCCGGCGAAGATCAAGCGCTGCTGGTCTGGTGGAATGCCTTCCTT 25114816 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 || || || || | ||| | || || || || || ||||| || ||||| || || Sbjct 25114817 GTCCTGGATCTTAGCTTTCACGTTATCGATGGTGTCAGAGGACTCGACCTCTAGCGTAAT 25114876 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| ||||| ||||| || || |||||||| Sbjct 25114877 CGTTTTACCGGTTAGGGTTTTGACGAAGATTTGCAT 25114912 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||||||| ||||| |||| || | || | || || ||| || || || Sbjct 23087944 ATACCACCTCTCAAACGAAGCACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCA 23088003 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | ||||| ||| || | |||||| ||||||||||| | ||||| ||||| || Sbjct 23088004 GCAAGGGTTCTTCCATCCTCAAGTTGTTTACCGGCAAAAATCAGCCTCTGCTGATCTGGG 23088063 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||| || || || |||| || | ||| ||| || || || || || Sbjct 23088064 GGGATGCCCTCTTTGTCCTGGATCTTGGCCTTAACATTATCAATGGTGTCCGAGGATTCC 23088123 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || || | || || ||||| |||||||| Sbjct 23088124 ACCTCAAGGGTGATGGTCTTCCCGGTCAAAGTCTTGACAAAGATTTGCAT 23088173 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||||||||| ||||| |||| || | || | || || ||| || || || Sbjct 23083476 ATGCCACCTCTCAAACGAAGCACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAATCA 23083535 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | ||||| ||| || | |||||| || || ||||| | ||||| ||||| ||| Sbjct 23083536 GCAAGGGTTCTTCCATCCTCAAGTTGTTTACCAGCGAAAATCAGCCTCTGCTGATCTGGA 23083595 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||| || || || |||| || | ||| ||| || || || || || Sbjct 23083596 GGGATGCCCTCTTTGTCCTGGATCTTGGCCTTAACATTATCAATGGTGTCCGAGGATTCC 23083655 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || || | || || ||||| |||||||| Sbjct 23083656 ACCTCAAGGGTGATGGTCTTCCCGGTCAAAGTCTTGACAAAGATTTGCAT 23083705 Score = 87.8 bits (96), Expect = 3e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||| | | || || || ||||||| || | || || |||||| || || | Sbjct 23082794 ACCACCACGAAGGCGGAGGACAAGATGCAGGGTGGATTCCTTCTGAATATTGTAATCCGC 23082853 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 || || | | ||| || ||||| || || |||||||| | ||||| ||||| || || Sbjct 23082854 CAAGGTACGACCATCTTCCAATTGCTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGG 23082913 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || || || || || || || || | ||| | ||| ||| ||||| || || || Sbjct 23082914 AATACCCTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATGGTATCAGAGCTTTCCAC 23082973 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || | |||| || || ||||| || || || |||||||||||||| Sbjct 23082974 CTCCAAGGTTACGGTCTTCCCTGTCAGAGTCTTCACAAATATTTGCAT 23083021 >seq19 Length=50746504 Score = 91.5 bits (100), Expect = 3e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 |||||| ||||||| || | || || |||||| || || | || || | | | Sbjct 29366602 CGAAGTGGAAGATGCATGGTGGATTCCTTCTGAATATTGTAATCTGCCAAGGTACGACCA 29366661 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || |||||||| | || |||||||| | || || ||||| ||||| || || || || Sbjct 29366662 TCTTCTAATTGCCTCCCAGCAAAAATGAGCCTTTGCTGATCTGGAGGGATACCCTCCTTG 29366721 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || || | ||| | ||| ||||||||| || || || || | || || Sbjct 29366722 TCCTGAATCTTAGCTTTCACATTGTCAATAGTATCAGAGCTTTCCACCTCCAAGGTAATG 29366781 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || || || |||||||||||||| Sbjct 29366782 GTCTTCCCTGTCAGAGTCTTCACAAATATTTGCAT 29366816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899641006395120