Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq17 102 1e-16 seq19 100 4e-16 seq13 96.9 5e-15 seq9 87.8 3e-12 seq7 87.8 3e-12 >seq17 Length=41641078 Score = 102 bits (112), Expect = 1e-16 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || || || ||||| || || ||| | || || ||| | | Sbjct 3129140 TGCAAATTTTTGTCAAGACCTTGACGGGAAAGACCATAACTTTAGAGGTTGAAGGTTCTG 3129199 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| ||| ||| || || || || ||||||||||| ||||| | Sbjct 3129200 ATACAATTGAAAATGTGAAAGCTAAGATTCAGGAAAAGGAGGGCATTCCACCGGATCAGC 3129259 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| || || ||||| || ||| | | || || |||||| ||| Sbjct 3129260 AGAGGCTTATTTTTGCTGGGAAGCAATTGGAAGATGAGCGTACCTTGGAAGATTACGATA 3129319 Query 146212 TACAAAAAGAATCGAC 146227 | ||||| ||||| || Sbjct 3129320 TTCAAAAGGAATCCAC 3129335 Score = 96.9 bits (106), Expect = 5e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | || || | ||||| || || ||||| | || || ||| | Sbjct 3125157 TGCAGATATTTGTGAAGACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCTG 3125216 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| ||| ||| || || || ||||| || || || ||||| | Sbjct 3125217 ATACTATTGACAATGTGAAAGCTAAGATTCAGGACAAGGAAGGTATCCCTCCAGATCAGC 3125276 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||||||||| || || ||||| || ||| | | || || ||||||| |||| Sbjct 3125277 AGAGGCTCATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCAGATTACAATA 3125336 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | || || ||||| ||| | ||| Sbjct 3125337 TTCAGAAGGAATCCACTTTGCAT 3125359 >seq19 Length=50746504 Score = 100 bits (110), Expect = 4e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | || || | ||||| || || ||||| | || || ||| | Sbjct 29366815 TGCAAATATTTGTGAAGACTCTGACAGGGAAGACCATTACCTTGGAGGTGGAAAGCTCTG 29366756 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| ||| ||| || || || || || || || || ||||| | Sbjct 29366755 ATACTATTGACAATGTGAAAGCTAAGATTCAGGACAAGGAGGGTATCCCTCCAGATCAGC 29366696 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| ||||||||||| || | |||||||| ||| | | || || ||||||| |||| Sbjct 29366695 AAAGGCTCATTTTTGCTGGGAGGCAATTAGAAGATGGTCGTACCTTGGCAGATTACAATA 29366636 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | || || ||||| || || ||| Sbjct 29366635 TTCAGAAGGAATCCACCATGCAT 29366613 >seq13 Length=45874162 Score = 96.9 bits (106), Expect = 5e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | || ||||| || || || |||| || || | Sbjct 29045550 TGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCTG 29045491 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | ||||| ||| ||| || ||| |||||||| || ||||| || |||| Sbjct 29045490 ACACTATTGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATCCCACCAGACCAAC 29045431 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||||||||| || ||||| | || ||| |||| || ||||||| || | Sbjct 29045430 AGAGGCTCATTTTTGCTGGAAAACAGCTTGAAGATGGCCGAACCTTGGCAGATTACAACA 29045371 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | || |||||||| || |||| || || Sbjct 29045370 TCCAGAAAGAATCTACCCTCCACTTGGT 29045343 Score = 96.9 bits (106), Expect = 5e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | || ||||| || || || |||| || || | Sbjct 29059484 TGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCTG 29059425 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | ||||| ||| ||| || ||| |||||||| || ||||| || |||| Sbjct 29059424 ACACTATTGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGTATCCCACCAGACCAAC 29059365 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||||||||| || ||||| | || ||| |||| || ||||||| || | Sbjct 29059364 AGAGGCTCATTTTTGCTGGAAAACAGCTTGAAGATGGCCGAACCTTGGCAGATTACAACA 29059305 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | || |||||||| || |||| || || Sbjct 29059304 TCCAGAAAGAATCTACCCTCCACTTGGT 29059277 Score = 93.3 bits (102), Expect = 7e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || || || |||||||| || ||| | || || ||| | | Sbjct 23087716 TGCAAATCTTTGTTAAGACTTTGACTGGAAAAACCATAACTTTGGAGGTTGAAAGTTCTG 23087657 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| || || || || || || ||||||||||| ||||| | Sbjct 23087656 ATACCATTGATAATGTGAAGGCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAGC 23087597 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| || || ||| | || ||| | | || || ||||||| |||| Sbjct 23087596 AGAGGCTTATTTTTGCTGGGAAGCAACTGGAAGATGGTCGTACCTTGGCAGATTACAATA 23087537 Query 146212 TACAAAAAGAATCGAC 146227 | || || ||||| || Sbjct 23087536 TTCAGAAGGAATCCAC 23087521 Score = 89.7 bits (98), Expect = 8e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| |||| || ||||| ||||| | || || || || Sbjct 25115139 TGCAGATCTTCGTCAAAACCCTAACCGGTAAAACGATTACGCTAGAGGTCGAGTCCTCCG 25115080 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | || || ||| |||||| ||| || |||||||||||||| ||||| | Sbjct 25115079 ACACAATCGATAACGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCACCGGATCAGC 25115020 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | || || || ||||||||| | || || ||||| | | ||||| |||| Sbjct 25115019 AGCGTTTGATCTTCGCCGGTAAACAACTCGAAGACGGCAGAACTCTCGCCGATTACAATA 25114960 Query 146212 TACAAAAAGAATCGACTATCCA 146233 | || ||||||||||| |||| Sbjct 25114959 TCCAGAAAGAATCGACGCTCCA 25114938 Score = 84.2 bits (92), Expect = 3e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || || || ||||| || || ||| | || || ||| | Sbjct 23083248 TGCAAATCTTCGTGAAGACTTTGACGGGAAAGACCATAACTTTGGAGGTTGAAAGCTCTG 23083189 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| || || ||||| || ||||| |||||||| || || | Sbjct 23083188 ACACCATTGATAATGTGAAGGCAAAGATACAGGACAAGGAAGGTATTCCACCAGACCAGC 23083129 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || ||||||||||| || || | || ||| | || | | |||||||||| Sbjct 23083128 AGAGGCTTATTTTTGCAGGGAAGCAGCTGGAAGATGGGCGTACCCTGGCTGATTATAATA 23083069 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATT 146242 | || || ||||| ||| | ||||| || || Sbjct 23083068 TCCAGAAGGAATCCACTCTGCATTTGGTGTT 23083038 >seq9 Length=50189283 Score = 87.8 bits (96), Expect = 3e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | || || ||| ||| || || ||||| | || || ||| | Sbjct 19677897 TGCAAATATTTGTGAAGACTCTAATAGGGAAGACCATTACCTTGGAGGTGGAAAGCTGTG 19677956 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| ||| ||| || || || || || || || || ||||| Sbjct 19677957 ATACTATTGACAATGTGAAAGCTAAGATTCAGGACAAGGAGGGTATCCCTCCAGATCAGT 19678016 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||||||||| || || ||||| || ||| | | || || ||||||| ||| Sbjct 19678017 AGAGGCTCATTTTTGCTGGGAAGCAATTGGAAGATGGTCGTACCTTGGCAGATTACGATA 19678076 Query 146212 TACAAAAAGAATC 146224 | ||||| ||||| Sbjct 19678077 TTCAAAAGGAATC 19678089 >seq7 Length=44630203 Score = 87.8 bits (96), Expect = 3e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || | || ||||| || || || |||| || || | Sbjct 36855589 TGCAAATCTTTGTCAAGACTCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCTG 36855648 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | ||||| ||| || || || |||||||| || ||||| || |||| Sbjct 36855649 ACACTATTGACAATGTCAAAGCCAAGATTCAGGACAAAGAAGGTATCCCACCAGACCAAC 36855708 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || ||||||||||| || ||||| | || ||| |||| || | ||||| || | Sbjct 36855709 AGAGGCTCATTTTTGCTGGCAAACAGCTTGAAGATGGCCGAACCTTGGCTGATTACAACA 36855768 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | ||||||||||| || |||| || || Sbjct 36855769 TCCAAAAAGAATCTACCCTCCACTTGGT 36855796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786154695947720