Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq1190 511 1e-140 seq13 396 8e-106 seq14 306 1e-78 seq11 297 6e-76 seq15 91.5 4e-14 >seq1190 Length=152218 Score = 511 bits (566), Expect = 1e-140 Identities = 711/985 (72%), Gaps = 12/985 (1%) Strand=Plus/Minus Query 28638 TAACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGAT 28697 ||||||| | || ||| | || |||||||| |||| |||||||| ||||||| Sbjct 1323 TAACTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGAT 1264 Query 28698 TCCGTGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAG 28756 ||| | | | | || || |||| || ||||| || || ||||| || || |||| Sbjct 1263 TCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTTATTGCTGCCCCTCCAG 1205 Query 28757 TTGACATTGATGGCATCCGCGAACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCA 28816 | || |||||||| || || || ||||| ||||| ||| || ||||||||||| |||| Sbjct 1204 TAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAATATCA 1145 Query 28817 TATCGGGAGCCGTCGTACCGAG--CAGCAATGCCATCGGACTACACTTCTACCCAATTTG 28874 | || || ||| | | || | | || || || || | ||||| || || ||||| Sbjct 1144 TTTCTGGTGCCATTATTCCTACTTCTGCG--GCTATAGGTTTGCACTTTTATCCTATTTG 1087 Query 28875 GGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTT 28934 |||||| || ||||||||||| | |||||||| || || | |||| | || | Sbjct 1086 GGAAGCGGCATCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCT 1027 Query 28935 CCACTTCCTCATTGGCGT--CTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGA 28992 |||||| | |||| || || |||| ||||||| || |||||||||||||| | ||| Sbjct 1026 ACACTTCTTACTTGGTGTAGCT-TGCT-ACATGGGGCGTGAGTGGGAACTTAGTTTTCGT 969 Query 28993 CTAGGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCG 29052 | || ||| | || |||||| ||| ||||| |||||||| || ||||| || |||| Sbjct 968 TTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTACTGCT 909 Query 29053 GTTTTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATT 29112 |||||| | |||| || | ||||| || ||| || | |||||| | || ||| Sbjct 908 GTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAGGAATT 849 Query 29113 TCAGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATAACATTCTCATGCACCCG 29172 ||||| || ||||| | ||| | || || || || || ||||| ||||| ||||| || Sbjct 848 TCAGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCA 789 Query 29173 TTCCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGT 29232 || |||||| | || || ||||| || ||||| ||||| ||||| ||||| ||||| ||| Sbjct 788 TTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 729 Query 29233 TCGCTTGTCACGTCCTCGCTTGTGC-GTGAGACGACTGAAGACATCTCTCAGAACTATGG 29291 || | || || || | | ||| | | || || || ||| | ||| || | || Sbjct 728 TCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 670 Query 29292 TTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTTGG 29351 ||||| ||||| ||||| ||||| || ||||| || ||||| ||||| ||||| ||||| Sbjct 669 TTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGG 610 Query 29352 ACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGC 29411 || ||||||||||||||||| |||||| ||| |||||| |||| |||||| | || Sbjct 609 CCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGC 550 Query 29412 TGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAA 29471 ||| ||||| || ||||| |||||||| | || || || | || ||||| || || Sbjct 549 TGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAA 490 Query 29472 TCTGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGTGTCATTAATAC 29531 | || ||||| || || ||||| || | | || | | |||||||| |||||||| Sbjct 489 CTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 430 Query 29532 TTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGC 29591 ||||||||| || | || || |||||||| || | |||||||||||||| |||||||| Sbjct 429 CTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGC 370 Query 29592 TCATAACTTCCCACTTGATCTGGCT 29616 |||||| ||||| || ||||| ||| Sbjct 369 TCATAATTTCCCTCTAGATCTAGCT 345 >seq13 Length=45874162 Score = 396 bits (438), Expect = 8e-106 Identities = 624/886 (70%), Gaps = 32/886 (4%) Strand=Plus/Plus Query 28738 TTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGAACCTGTCGCTGGAAGTCTT 28797 || ||||| || || | ||| || |||||||| || || || ||||| ||||| ||| Sbjct 7358216 TTTATTGCTGCCCCTCTAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTA 7358275 Query 28798 CTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG--CAGCAATGCCATCGGAC 28855 || ||||||||||| ||||| || || ||| | | || | | || || || || Sbjct 7358276 CTTTATGGAAACAATATCATTTCTGGTGCCATTATTCCTACTTCTGCG--GCTATAGGTT 7358333 Query 28856 TACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGAC 28915 | ||||| || || ||||||||||| || ||||||||||| | || ||||| || | Sbjct 7358334 TGCACTTTTATCCTATTTGGGAAGCGGCATCTGTTGATGAATGGTTATATAACGGCGGTC 7358393 Query 28916 CGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGT--CTATGCTTACATGGGACGCGA 28973 | | |||| | | | |||||| | |||| || || |||| ||||||| || || Sbjct 7358394 CTTATGAACTAATTATTCTACACTTCTTACTTGGTGTAGCT-TGCT-ACATGGGGCGTGA 7358451 Query 28974 GTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCC 29033 |||||||||||| | ||| | || ||| | || || ||| ||| Sbjct 7358452 GTGGGAACTTAGTTTTCGTTTGGGTATGCGTCCTTGAATT---------------GCT-- 7358494 Query 29034 CGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGA 29093 || ||||| || |||| |||||| | |||| || | ||||| || ||| || Sbjct 7358495 -GTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGA 7358553 Query 29094 CGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACA 29153 | |||||| | || |||||||| || | ||| | ||| | || || || || | || Sbjct 7358554 TGGTATGCCTCTAGGAATTTCAGGTACTTCCAATTTTATGATTGTATTTCAGGCTAAGCA 7358613 Query 29154 TAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCT 29213 ||| ||||| ||||| || || |||||| ||| || ||||| || ||||| ||||| | Sbjct 7358614 TAATATTCTTATGCATCCATTTCACATGTTGGTTGTAGCTGGTGTATTCGGCGGCTCCTT 7358673 Query 29214 ATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTGC-GTGAGACGACTGAAG 29272 ||||||||| ||||| | ||| | || || | | | ||| | | || || || ||| Sbjct 7358674 ATTTAGTGCTATGCATGATTCCTTGGTAACTTT-TAGTTTGATCAGGGAAACCACAGAAA 7358732 Query 29273 ACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAG 29332 | ||| || | ||||||| ||||| ||||| || || || ||||| || |||| Sbjct 7358733 ATGAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAGGAAACCTATAATATTGTAG 7358792 Query 29333 CCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTT 29392 ||||| ||||| ||||| || ||||||||||||||||| |||||| ||| |||| Sbjct 7358793 TTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTT 7358852 Query 29393 CTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCG 29452 || |||| |||||| ||||||| ||||| | ||||| |||||||| | || || | | Sbjct 7358853 CTTTACATTTCTTCTTTGCTGCTTGGCCTATAGTAGGTATTTGGTTTACCGCTTTAG--G 7358910 Query 29453 TTTCTACA--ATGGCGTTTAATCTGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAA 29510 | || ||| ||||| || || | || ||||| || || ||||| || | | || | Sbjct 7358911 TATCAACACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAG 7358970 Query 29511 CAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGA 29570 | |||||||| |||||||| ||||||||| || | || || |||||||| || | || Sbjct 7358971 TCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGA 7359030 Query 29571 AGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGCT 29616 |||||||||||| |||||||||||||| ||||| || ||||| ||| Sbjct 7359031 AGTAATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCT 7359076 >seq14 Length=49042192 Score = 306 bits (338), Expect = 1e-78 Identities = 416/574 (72%), Gaps = 6/574 (1%) Strand=Plus/Plus Query 28858 CACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCG 28917 ||||| || || ||||||||||| || ||||||||||| | || ||||| | || Sbjct 41705907 CACTTTTATCCTATTTGGGAAGCGGCATCTATTGATGAATGGTTATATAACGGCGATCCT 41705966 Query 28918 TTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGT--CTATGCTTACATGGGACGCGAGT 28975 | |||| | || | |||||| | |||| || || ||| |||||||| || |||| Sbjct 41705967 TATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGGCGTGAGT 41706024 Query 28976 GGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCG 29035 |||||||||| | ||| | || ||| | || | |||| ||| ||||| |||||||| | Sbjct 41706025 GGGAACTTAGTTTTCGTTTGGGTATGCGTCCTTCGATTGCTGTTGCATATTCAGCTCCTG 41706084 Query 29036 TCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGACG 29095 | ||||| || |||| |||||| | |||| || | ||||| || ||| || | Sbjct 41706085 TTGCAGCCGCTACTGCTGTTTTCTTTATCTATCCTATTGGTCAGGGAAGCTTTTCAGATG 41706144 Query 29096 CGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATA 29155 |||||| | || |||| ||| || ||||| | ||| | || || || || || |||| Sbjct 41706145 GTATGCCTCTAGGAATTTTAGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATA 41706204 Query 29156 ACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTAT 29215 | ||||| ||||| || || |||||| | || || ||||| || ||||| ||||| |||| Sbjct 41706205 ATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTAT 41706264 Query 29216 TTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTG-TGCGTGAGACGACTGAAGAC 29274 | |||| ||||| ||||| |||| | | || | ||| | | || || || ||| | Sbjct 41706265 TCAGTGATATGCATGGTTC-CTTGGTAACTTCTTGTTTGATCAGGGAAACCACAGAAAAT 41706323 Query 29275 ATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCC 29334 ||| || | ||||||| ||||| ||||| ||||| || ||||| || ||||| Sbjct 41706324 GAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCT 41706383 Query 29335 GCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCT 29394 ||||| ||||| ||||| || ||||||||||||||||| |||||| ||| | |||||| Sbjct 41706384 GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTGTCGTTCT 41706443 Query 29395 CTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAG 29428 |||| |||||| | ||||| ||||| || |||| Sbjct 41706444 TTACATTTCTTCTTAGCTGCTTGGCCAGTAGTAG 41706477 >seq11 Length=34766867 Score = 297 bits (328), Expect = 6e-76 Identities = 414/574 (72%), Gaps = 6/574 (1%) Strand=Plus/Minus Query 28858 CACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCG 28917 ||||| || || ||||||||||| || ||||||||||| | || | ||| || || Sbjct 15042876 CACTTTTATCCTATTTGGGAAGCGGCATCTGTTGATGAATGGTTATATAGCGGTGGTCCT 15042817 Query 28918 TTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGT--CTATGCTTACATGGGACGCGAGT 28975 | |||| | || | |||||| | |||| || || |||| ||||||| | |||| Sbjct 15042816 TATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT-TGCT-ACATGGGGTGTGAGT 15042759 Query 28976 GGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCCG 29035 |||||||||| | ||| | || ||| | || | |||| ||| ||||| |||||||| | Sbjct 15042758 GGGAACTTAGTTTTCGTTTGGGCATGCGTCCTTCGATTGCTGTTGCATATTCAGCTCCTG 15042699 Query 29036 TCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGTCAAGGTTCTTTTAGCGACG 29095 | ||||| || |||| |||||| | |||| || | ||||| || ||| || | Sbjct 15042698 TTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGATG 15042639 Query 29096 CGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTGGTGTTCCAAGCCGAACATA 29155 |||||| | | |||| ||| || ||||| | ||| | || || || || || |||| Sbjct 15042638 GTATGCCTCTAAGAATTTTAGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATA 15042579 Query 29156 ACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGAGTGTTCGGTGGCTCGCTAT 29215 | ||||| ||||| || || |||||| | || || ||||| || ||||| ||||| |||| Sbjct 15042578 ATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTAT 15042519 Query 29216 TTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTG-TGCGTGAGACGACTGAAGAC 29274 | ||||| ||||| ||||| |||| | | || | ||| | | || || || ||| | Sbjct 15042518 TCAGTGCTATGCATGGTTC-CTTGGTAACTTCTTGTTTGATCAGGGAAACCACAGAAAAT 15042460 Query 29275 ATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCC 29334 ||| || | ||||||| ||||| ||||| ||||| || ||||| || ||||| Sbjct 15042459 GAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCT 15042400 Query 29335 GCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCT 29394 ||||| ||||| ||||| || ||||||||||||||||| |||||| ||| | |||||| Sbjct 15042399 GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTGTCGTTCT 15042340 Query 29395 CTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAG 29428 |||| |||||| | ||||| |||| || |||| Sbjct 15042339 TTACATTTCTTCTTAGCTGCTTGGCTTGTAGTAG 15042306 >seq15 Length=51756343 Score = 91.5 bits (100), Expect = 4e-14 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 29290 GGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACATCGTAGCCGCTCACGGTTACTTT 29349 ||||||| ||||| ||||| |||| || |||| || |||| || ||| ||||| ||| Sbjct 19465063 GGTTACATATTTGGTCAAGAGAAAGAAACCAATAATATTGTAGTCGTTCATGGTTATTTT 19465004 Query 29350 GGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACACTTCTTCCTT 29409 || | ||||| ||||||||||| |||||| ||| |||||| |||| ||||| ||| Sbjct 19465003 GGCCCATTGATATTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTACTT 19464944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146663525690086