Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20max_20[refseq_20GCF_5F000004515.4_202015-11-04] 1,191 sequences; 978,971,636 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq1190 634 2e-177 seq13 475 1e-129 seq14 365 1e-96 seq11 356 7e-94 >seq1190 Length=152218 Score = 634 bits (702), Expect = 2e-177 Identities = 741/990 (75%), Gaps = 12/990 (1%) Strand=Plus/Minus Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783 || ||| ||||| ||||||| || || || |||||||| || || |||||||| || Sbjct 1328 TTCTGTAACTGGATAACCAGCACCGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 1269 Query 18784 ATGATTCCGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACC 18842 |||||||| | | | | || ||| | ||| || ||||| || || |||||||| || Sbjct 1268 ATGATTCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTTATTGCTGCCCC 1210 Query 18843 TCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAA 18902 ||| ||||| |||||||| || || ||||||||| | || ||| |||||||||||||| Sbjct 1209 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTATGGAAACAA 1150 Query 18903 CATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCA 18960 ||||| || || ||| | |||| | | || || || || | ||||| || || Sbjct 1149 TATCATTTCTGGTGCCATTATTCCTACTTCTGCG--GCTATAGGTTTGCACTTTTATCCT 1092 Query 18961 ATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTG 19020 ||||||||||| || ||||||||||| | |||||||| || || | |||| | Sbjct 1091 ATTTGGGAAGCGGCATCTGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATT 1032 Query 19021 GTCTTCCACTTCCTCATTGGCGT--CTATGCTTACATGGGACGCGAGTGGGAACTTAGCT 19078 || | |||||| | |||| || || |||| ||||||| || |||||||||||||| | Sbjct 1031 GTTCTACACTTCTTACTTGGTGTAGCT-TGCT-ACATGGGGCGTGAGTGGGAACTTAGTT 974 Query 19079 ATCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCT 19138 ||| | || ||||| ||||||||| |||||| || |||||||||||||| || || Sbjct 973 TTCGTTTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCCGCTA 914 Query 19139 CTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGG 19198 |||| || ||| | ||||||| ||||||| || |||| || | ||||||| | | Sbjct 913 CTGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGATGGTATGCCTCTAG 854 Query 19199 GTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGC 19258 | ||| ||||| ||||| | ||| ||||||| |||||||| ||||| || || |||| Sbjct 853 GAATTTCAGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGC 794 Query 19259 ACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGC 19318 | || || |||||| | ||||| |||||||| |||||||| || ||||| ||||| |||| Sbjct 793 ATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGC 734 Query 19319 ACGGTTCGCTTGTTACGTCCTCGCTTGTGC-GTGAAACTACTGAAGAGGTATCTCAGAAC 19377 | ||||| |||| || | || | ||| | | ||||| || ||| | | |||| || Sbjct 733 ATGGTTC-CTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAAT 675 Query 19378 TATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTAT 19437 | || |||| ||||| ||||| ||||| || ||||| ||||| ||||||||||| ||| Sbjct 674 GAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTAT 615 Query 19438 TTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTT 19497 ||||| || | || ||||| || ||| ||||||||| |||||| |||||||||| Sbjct 614 TTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACATTTCTTC 555 Query 19498 TTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCA 19557 || |||||||||||||| || || ||||||||| |||| | || | ||||| ||||| Sbjct 554 TTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATCAGCACTATGGCT 495 Query 19558 TTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATT 19617 |||||||| ||||| || || || ||||| ||| | |||| | | |||||||| ||| Sbjct 494 TTCAACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATT 435 Query 19618 GATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGT 19677 |||| |||||||| ||| | || || |||||||| || | || |||||||| |||||| Sbjct 434 AATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTAATGCATGAACGT 375 Query 19678 AATGCTCATAACTTCCCACTTGATTTGGCT 19707 ||||||||||| ||||| || ||| | ||| Sbjct 374 AATGCTCATAATTTCCCTCTAGATCTAGCT 345 >seq13 Length=45874162 Score = 475 bits (526), Expect = 1e-129 Identities = 638/884 (72%), Gaps = 28/884 (3%) Strand=Plus/Plus Query 18829 TTCATTGCTGCACCTCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTT 18888 || |||||||| |||| ||||| |||||||| || || ||||||||| | || ||| Sbjct 7358216 TTTATTGCTGCCCCTCTAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTA 7358275 Query 18889 CTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGAC 18946 |||||||||||||| ||||| || || ||| | |||| | | || || || || Sbjct 7358276 CTTTATGGAAACAATATCATTTCTGGTGCCATTATTCCTACTTCTGCG--GCTATAGGTT 7358333 Query 18947 TACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGAC 19006 | ||||| || || ||||||||||| || ||||||||||| | || ||||| || | Sbjct 7358334 TGCACTTTTATCCTATTTGGGAAGCGGCATCTGTTGATGAATGGTTATATAACGGCGGTC 7358393 Query 19007 CGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGT--CTATGCTTACATGGGACGCGA 19064 | | |||| | | | |||||| | |||| || || |||| ||||||| || || Sbjct 7358394 CTTATGAACTAATTATTCTACACTTCTTACTTGGTGTAGCT-TGCT-ACATGGGGCGTGA 7358451 Query 19065 GTGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCC 19124 |||||||||||| | ||| | || ||||| ||||| ||| | Sbjct 7358452 GTGGGAACTTAGTTTTCGTTTGGGTATGCGTCCTTGAATTG------------------C 7358493 Query 19125 TGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGA 19184 |||||| || || |||| || ||| | ||||||| ||||||| || |||| || Sbjct 7358494 TGTTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGA 7358553 Query 19185 CGCTATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACA 19244 | ||||||| | || ||| ||||| | ||| | ||| ||||||| |||||| | || Sbjct 7358554 TGGTATGCCTCTAGGAATTTCAGGTACTTCCAATTTTATGATTGTATTTCAGGCTAAGCA 7358613 Query 19245 TAACATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACT 19304 ||| || || ||||| || || |||||| | | ||| |||||||| |||||||| || | Sbjct 7358614 TAATATTCTTATGCATCCATTTCACATGTTGGTTGTAGCTGGTGTATTCGGCGGCTCCTT 7358673 Query 19305 ATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGC-GTGAAACTACTGAAG 19363 ||||||||| ||||| | ||| |||| || | | | ||| | | ||||| || ||| Sbjct 7358674 ATTTAGTGCTATGCATGATTC-CTTGGTAACTTTTAGTTTGATCAGGGAAACCACAGAAA 7358732 Query 19364 AGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTG 19423 | | |||| || | || |||| ||||| ||||| || || || ||||| ||||| | Sbjct 7358733 ATGAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAGGAAACCTATAATATTGTAG 7358792 Query 19424 CTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTT 19483 ||||||||| |||||||| || | || ||||| || ||| ||||||||| |||| Sbjct 7358793 TTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTT 7358852 Query 19484 CTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGG 19543 || |||||||||| || |||||||||||| | || || ||||||||| |||| | || Sbjct 7358853 CTTTACATTTCTTCTTTGCTGCTTGGCCTATAGTAGGTATTTGGTTTACCGCTTTAGGTA 7358912 Query 19544 TAAGCACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACA 19603 | | ||| ||||| |||||||| ||||| || || || ||||| ||| | |||| | Sbjct 7358913 TCAACACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTC 7358972 Query 19604 ATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGG 19663 | |||||||| ||| |||| |||||||| ||| | || || |||||||| || | || | Sbjct 7358973 AAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAG 7359032 Query 19664 TAATGCACGAACGTAATGCTCATAACTTCCCACTTGATTTGGCT 19707 ||||||| ||||||||||||||||| ||||| || ||| | ||| Sbjct 7359033 TAATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCT 7359076 >seq14 Length=49042192 Score = 365 bits (404), Expect = 1e-96 Identities = 428/572 (75%), Gaps = 6/572 (1%) Strand=Plus/Plus Query 18949 CACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCG 19008 ||||| || || ||||||||||| || ||||||||||| | || ||||| | || Sbjct 41705907 CACTTTTATCCTATTTGGGAAGCGGCATCTATTGATGAATGGTTATATAACGGCGATCCT 41705966 Query 19009 TTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGT--CTATGCTTACATGGGACGCGAGT 19066 | |||| | || | |||||| | |||| || || ||| |||||||| || |||| Sbjct 41705967 TATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGGCGTGAGT 41706024 Query 19067 GGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTG 19126 |||||||||| | ||| | || ||||| |||| |||| |||||| || |||||||||| Sbjct 41706025 GGGAACTTAGTTTTCGTTTGGGTATGCGTCCTTCGATTGCTGTTGCATATTCAGCTCCTG 41706084 Query 19127 TTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACG 19186 |||| || || |||| || ||| || ||||||| ||||||| || |||| || | Sbjct 41706085 TTGCAGCCGCTACTGCTGTTTTCTTTATCTATCCTATTGGTCAGGGAAGCTTTTCAGATG 41706144 Query 19187 CTATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATA 19246 ||||||| | || ||| ||||| ||||| | ||| ||||||| |||||||| |||| Sbjct 41706145 GTATGCCTCTAGGAATTTTAGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATA 41706204 Query 19247 ACATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTAT 19306 | || || ||||| || || |||||| | ||||| |||||||| |||||||| || |||| Sbjct 41706205 ATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTAT 41706264 Query 19307 TTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAG 19365 | |||| ||||| ||||| |||| || | || | ||| | | ||||| || ||| | Sbjct 41706265 TCAGTGATATGCATGGTTC-CTTGGTAACTTCTTGTTTGATCAGGGAAACCACAGAAAAT 41706323 Query 19366 GTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCT 19425 | |||| || | || |||| ||||| ||||| ||||| || ||||| ||||| ||| Sbjct 41706324 GAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCT 41706383 Query 19426 GCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCT 19485 |||||||| |||||||| || | || ||||| || ||| ||||||||| | |||||| Sbjct 41706384 GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTGTCGTTCT 41706443 Query 19486 CTACATTTCTTTTTGGCTGCTTGGCCTGTGGT 19517 |||||||||| || ||||||||||| || || Sbjct 41706444 TTACATTTCTTCTTAGCTGCTTGGCCAGTAGT 41706475 >seq11 Length=34766867 Score = 356 bits (394), Expect = 7e-94 Identities = 426/572 (74%), Gaps = 6/572 (1%) Strand=Plus/Minus Query 18949 CACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCG 19008 ||||| || || ||||||||||| || ||||||||||| | || | ||| || || Sbjct 15042876 CACTTTTATCCTATTTGGGAAGCGGCATCTGTTGATGAATGGTTATATAGCGGTGGTCCT 15042817 Query 19009 TTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGT--CTATGCTTACATGGGACGCGAGT 19066 | |||| | || | |||||| | |||| || || |||| ||||||| | |||| Sbjct 15042816 TATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT-TGCT-ACATGGGGTGTGAGT 15042759 Query 19067 GGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTG 19126 |||||||||| | ||| | || ||||| |||| |||| |||||| || |||||||||| Sbjct 15042758 GGGAACTTAGTTTTCGTTTGGGCATGCGTCCTTCGATTGCTGTTGCATATTCAGCTCCTG 15042699 Query 19127 TTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACG 19186 |||| || || |||| || ||| | ||||||| ||||||| || |||| || | Sbjct 15042698 TTGCAGCCGCTACTGCTGTTTTCTTGATCTATCCTATTGGTCAGGGAAGCTTTTCAGATG 15042639 Query 19187 CTATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATA 19246 ||||||| | | ||| ||||| ||||| | ||| ||||||| |||||||| |||| Sbjct 15042638 GTATGCCTCTAAGAATTTTAGGTACTTTCAATTTTATGATTGTATTTCAGGCTGAGCATA 15042579 Query 19247 ACATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTAT 19306 | || || ||||| || || |||||| | ||||| |||||||| |||||||| || |||| Sbjct 15042578 ATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTAT 15042519 Query 19307 TTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGC-GTGAAACTACTGAAGAG 19365 | ||||| ||||| ||||| |||| || | || | ||| | | ||||| || ||| | Sbjct 15042518 TCAGTGCTATGCATGGTTC-CTTGGTAACTTCTTGTTTGATCAGGGAAACCACAGAAAAT 15042460 Query 19366 GTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCT 19425 | |||| || | || |||| ||||| ||||| ||||| || ||||| ||||| ||| Sbjct 15042459 GAATCTGCTAATGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCT 15042400 Query 19426 GCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCT 19485 |||||||| |||||||| || | || ||||| || ||| ||||||||| | |||||| Sbjct 15042399 GCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTGTCGTTCT 15042340 Query 19486 CTACATTTCTTTTTGGCTGCTTGGCCTGTGGT 19517 |||||||||| || |||||||||| ||| || Sbjct 15042339 TTACATTTCTTCTTAGCTGCTTGGCTTGTAGT 15042308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141146803714878